Protein–RNA interactions for Protein: J3QNR8

Trim34b, Tripartite motif-containing 34B, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34bJ3QNR8 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Trim34bJ3QNR8 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
Trim34bJ3QNR8 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC23.39■■□□□ 1.33
Trim34bJ3QNR8 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC23.38■■□□□ 1.33
Trim34bJ3QNR8 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC23.38■■□□□ 1.33
Trim34bJ3QNR8 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Trim34bJ3QNR8 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Trim34bJ3QNR8 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Trim34bJ3QNR8 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC23.38■■□□□ 1.33
Trim34bJ3QNR8 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Trim34bJ3QNR8 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
Trim34bJ3QNR8 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Trim34bJ3QNR8 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Trim34bJ3QNR8 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Trim34bJ3QNR8 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Trim34bJ3QNR8 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC23.37■■□□□ 1.33
Trim34bJ3QNR8 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC23.37■■□□□ 1.33
Trim34bJ3QNR8 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
Trim34bJ3QNR8 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Trim34bJ3QNR8 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Trim34bJ3QNR8 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Trim34bJ3QNR8 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Trim34bJ3QNR8 Gm12527-201ENSMUST00000117967 564 ntBASIC23.36■■□□□ 1.33
Trim34bJ3QNR8 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC23.36■■□□□ 1.33
Trim34bJ3QNR8 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Trim34bJ3QNR8 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Trim34bJ3QNR8 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Trim34bJ3QNR8 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Trim34bJ3QNR8 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Trim34bJ3QNR8 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC23.36■■□□□ 1.33
Trim34bJ3QNR8 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Trim34bJ3QNR8 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC23.35■■□□□ 1.33
Trim34bJ3QNR8 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Trim34bJ3QNR8 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Trim34bJ3QNR8 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Trim34bJ3QNR8 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC23.35■■□□□ 1.33
Trim34bJ3QNR8 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC23.35■■□□□ 1.33
Trim34bJ3QNR8 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Trim34bJ3QNR8 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC23.35■■□□□ 1.33
Trim34bJ3QNR8 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
Trim34bJ3QNR8 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trim34bJ3QNR8 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trim34bJ3QNR8 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
Trim34bJ3QNR8 Gm20760-201ENSMUST00000179197 648 ntBASIC23.34■■□□□ 1.33
Trim34bJ3QNR8 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC23.34■■□□□ 1.33
Trim34bJ3QNR8 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Trim34bJ3QNR8 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Trim34bJ3QNR8 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC23.33■■□□□ 1.33
Trim34bJ3QNR8 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Trim34bJ3QNR8 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Trim34bJ3QNR8 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC23.33■■□□□ 1.33
Trim34bJ3QNR8 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC23.33■■□□□ 1.33
Trim34bJ3QNR8 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC23.33■■□□□ 1.33
Trim34bJ3QNR8 AC122769.4-201ENSMUST00000228166 901 ntBASIC23.33■■□□□ 1.33
Trim34bJ3QNR8 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC23.33■■□□□ 1.33
Trim34bJ3QNR8 Gm6277-202ENSMUST00000224036 2779 ntBASIC23.33■■□□□ 1.32
Trim34bJ3QNR8 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Trim34bJ3QNR8 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
Trim34bJ3QNR8 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trim34bJ3QNR8 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trim34bJ3QNR8 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Trim34bJ3QNR8 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trim34bJ3QNR8 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trim34bJ3QNR8 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Trim34bJ3QNR8 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trim34bJ3QNR8 Gm38160-201ENSMUST00000193090 2499 ntBASIC23.32■■□□□ 1.32
Trim34bJ3QNR8 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trim34bJ3QNR8 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Trim34bJ3QNR8 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Trim34bJ3QNR8 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC23.31■■□□□ 1.32
Trim34bJ3QNR8 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Trim34bJ3QNR8 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Trim34bJ3QNR8 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
Trim34bJ3QNR8 Gm26971-201ENSMUST00000182423 1072 ntBASIC23.31■■□□□ 1.32
Trim34bJ3QNR8 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Trim34bJ3QNR8 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Trim34bJ3QNR8 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Trim34bJ3QNR8 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Trim34bJ3QNR8 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Trim34bJ3QNR8 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trim34bJ3QNR8 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trim34bJ3QNR8 Gm37563-201ENSMUST00000192580 1513 ntBASIC23.3■■□□□ 1.32
Trim34bJ3QNR8 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trim34bJ3QNR8 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Trim34bJ3QNR8 Gm26524-201ENSMUST00000192339 390 ntBASIC23.3■■□□□ 1.32
Trim34bJ3QNR8 Gm20049-201ENSMUST00000219950 730 ntBASIC23.3■■□□□ 1.32
Trim34bJ3QNR8 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trim34bJ3QNR8 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Trim34bJ3QNR8 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trim34bJ3QNR8 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Trim34bJ3QNR8 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
Trim34bJ3QNR8 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC23.29■■□□□ 1.32
Trim34bJ3QNR8 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
Trim34bJ3QNR8 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trim34bJ3QNR8 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Trim34bJ3QNR8 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC23.29■■□□□ 1.32
Trim34bJ3QNR8 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trim34bJ3QNR8 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC23.29■■□□□ 1.32
Trim34bJ3QNR8 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Trim34bJ3QNR8 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms