Protein–RNA interactions for Protein: G5E8X0

Cldn20, Claudin, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn20G5E8X0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn20G5E8X0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Cldn20G5E8X0 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn20G5E8X0 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn20G5E8X0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.53■□□□□ 0.24
Cldn20G5E8X0 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC16.53■□□□□ 0.24
Cldn20G5E8X0 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn20G5E8X0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn20G5E8X0 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn20G5E8X0 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn20G5E8X0 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn20G5E8X0 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Cldn20G5E8X0 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn20G5E8X0 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn20G5E8X0 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn20G5E8X0 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn20G5E8X0 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn20G5E8X0 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Cldn20G5E8X0 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Cldn20G5E8X0 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Cldn20G5E8X0 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cldn20G5E8X0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Cldn20G5E8X0 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Cldn20G5E8X0 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Cldn20G5E8X0 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cldn20G5E8X0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
Cldn20G5E8X0 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cldn20G5E8X0 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.23
Cldn20G5E8X0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cldn20G5E8X0 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Cldn20G5E8X0 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Cldn20G5E8X0 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.51■□□□□ 0.23
Cldn20G5E8X0 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.51■□□□□ 0.23
Cldn20G5E8X0 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn20G5E8X0 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn20G5E8X0 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn20G5E8X0 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn20G5E8X0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn20G5E8X0 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn20G5E8X0 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Cldn20G5E8X0 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Cldn20G5E8X0 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn20G5E8X0 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
Cldn20G5E8X0 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn20G5E8X0 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.51■□□□□ 0.23
Cldn20G5E8X0 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn20G5E8X0 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn20G5E8X0 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn20G5E8X0 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Cldn20G5E8X0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn20G5E8X0 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn20G5E8X0 Gm43548-201ENSMUST00000197139 2353 ntBASIC16.5■□□□□ 0.23
Cldn20G5E8X0 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
Cldn20G5E8X0 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.5■□□□□ 0.23
Cldn20G5E8X0 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC16.5■□□□□ 0.23
Cldn20G5E8X0 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn20G5E8X0 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn20G5E8X0 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn20G5E8X0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.5■□□□□ 0.23
Cldn20G5E8X0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.5■□□□□ 0.23
Cldn20G5E8X0 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cldn20G5E8X0 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.5■□□□□ 0.23
Cldn20G5E8X0 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn20G5E8X0 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn20G5E8X0 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn20G5E8X0 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn20G5E8X0 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Cldn20G5E8X0 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.49■□□□□ 0.23
Cldn20G5E8X0 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn20G5E8X0 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC16.49■□□□□ 0.23
Cldn20G5E8X0 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn20G5E8X0 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC16.49■□□□□ 0.23
Cldn20G5E8X0 Gm10657-201ENSMUST00000193528 1031 ntBASIC16.49■□□□□ 0.23
Cldn20G5E8X0 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Cldn20G5E8X0 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn20G5E8X0 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn20G5E8X0 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn20G5E8X0 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.49■□□□□ 0.23
Cldn20G5E8X0 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn20G5E8X0 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.49■□□□□ 0.23
Cldn20G5E8X0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cldn20G5E8X0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
Cldn20G5E8X0 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Cldn20G5E8X0 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cldn20G5E8X0 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cldn20G5E8X0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Cldn20G5E8X0 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.48■□□□□ 0.23
Cldn20G5E8X0 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cldn20G5E8X0 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.48■□□□□ 0.23
Cldn20G5E8X0 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cldn20G5E8X0 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Cldn20G5E8X0 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.48■□□□□ 0.23
Cldn20G5E8X0 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cldn20G5E8X0 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cldn20G5E8X0 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Cldn20G5E8X0 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cldn20G5E8X0 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cldn20G5E8X0 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cldn20G5E8X0 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cldn20G5E8X0 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms