Protein–RNA interactions for Protein: G3X8Z7

Chrna9, Cholinergic receptor, nicotinic, alpha polypeptide 9, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna9G3X8Z7 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Chrna9G3X8Z7 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Chrna9G3X8Z7 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Chrna9G3X8Z7 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.58■□□□□ 0.88
Chrna9G3X8Z7 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Chrna9G3X8Z7 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
Chrna9G3X8Z7 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
Chrna9G3X8Z7 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chrna9G3X8Z7 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chrna9G3X8Z7 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chrna9G3X8Z7 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chrna9G3X8Z7 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chrna9G3X8Z7 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Chrna9G3X8Z7 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Chrna9G3X8Z7 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.56■□□□□ 0.88
Chrna9G3X8Z7 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chrna9G3X8Z7 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chrna9G3X8Z7 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chrna9G3X8Z7 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Chrna9G3X8Z7 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Chrna9G3X8Z7 Gm12821-201ENSMUST00000120022 600 ntBASIC20.56■□□□□ 0.88
Chrna9G3X8Z7 Gm7860-201ENSMUST00000121190 879 ntBASIC20.56■□□□□ 0.88
Chrna9G3X8Z7 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.56■□□□□ 0.88
Chrna9G3X8Z7 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chrna9G3X8Z7 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Chrna9G3X8Z7 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chrna9G3X8Z7 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chrna9G3X8Z7 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Chrna9G3X8Z7 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Chrna9G3X8Z7 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Chrna9G3X8Z7 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.55■□□□□ 0.88
Chrna9G3X8Z7 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC20.55■□□□□ 0.88
Chrna9G3X8Z7 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Chrna9G3X8Z7 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chrna9G3X8Z7 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chrna9G3X8Z7 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Chrna9G3X8Z7 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chrna9G3X8Z7 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chrna9G3X8Z7 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Chrna9G3X8Z7 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chrna9G3X8Z7 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.54■□□□□ 0.88
Chrna9G3X8Z7 Gm27801-201ENSMUST00000184174 223 ntBASIC20.54■□□□□ 0.88
Chrna9G3X8Z7 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.54■□□□□ 0.88
Chrna9G3X8Z7 Appbp2os-202ENSMUST00000206972 447 ntBASIC20.54■□□□□ 0.88
Chrna9G3X8Z7 Gm45417-201ENSMUST00000209533 758 ntBASIC20.54■□□□□ 0.88
Chrna9G3X8Z7 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chrna9G3X8Z7 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Chrna9G3X8Z7 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chrna9G3X8Z7 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Chrna9G3X8Z7 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Chrna9G3X8Z7 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Chrna9G3X8Z7 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chrna9G3X8Z7 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Chrna9G3X8Z7 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.53■□□□□ 0.88
Chrna9G3X8Z7 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.53■□□□□ 0.88
Chrna9G3X8Z7 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chrna9G3X8Z7 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.53■□□□□ 0.88
Chrna9G3X8Z7 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.53■□□□□ 0.88
Chrna9G3X8Z7 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Chrna9G3X8Z7 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Chrna9G3X8Z7 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.52■□□□□ 0.88
Chrna9G3X8Z7 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Chrna9G3X8Z7 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Chrna9G3X8Z7 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Chrna9G3X8Z7 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chrna9G3X8Z7 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Chrna9G3X8Z7 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chrna9G3X8Z7 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Chrna9G3X8Z7 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chrna9G3X8Z7 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Chrna9G3X8Z7 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chrna9G3X8Z7 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Chrna9G3X8Z7 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chrna9G3X8Z7 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Chrna9G3X8Z7 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chrna9G3X8Z7 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chrna9G3X8Z7 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chrna9G3X8Z7 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chrna9G3X8Z7 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Chrna9G3X8Z7 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chrna9G3X8Z7 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Chrna9G3X8Z7 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.5■□□□□ 0.87
Chrna9G3X8Z7 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chrna9G3X8Z7 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.5■□□□□ 0.87
Chrna9G3X8Z7 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
Chrna9G3X8Z7 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chrna9G3X8Z7 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Chrna9G3X8Z7 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chrna9G3X8Z7 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chrna9G3X8Z7 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chrna9G3X8Z7 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chrna9G3X8Z7 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Chrna9G3X8Z7 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chrna9G3X8Z7 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Chrna9G3X8Z7 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Chrna9G3X8Z7 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chrna9G3X8Z7 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chrna9G3X8Z7 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chrna9G3X8Z7 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.5■□□□□ 0.87
Chrna9G3X8Z7 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms