Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdh11xF6ZNL5 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Pcdh11xF6ZNL5 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.1■□□□□ 0.97
Pcdh11xF6ZNL5 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdh11xF6ZNL5 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdh11xF6ZNL5 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdh11xF6ZNL5 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdh11xF6ZNL5 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdh11xF6ZNL5 Gm43231-201ENSMUST00000202960 2258 ntBASIC21.1■□□□□ 0.97
Pcdh11xF6ZNL5 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdh11xF6ZNL5 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh11xF6ZNL5 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.09■□□□□ 0.97
Pcdh11xF6ZNL5 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh11xF6ZNL5 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh11xF6ZNL5 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh11xF6ZNL5 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh11xF6ZNL5 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Pcdh11xF6ZNL5 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh11xF6ZNL5 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh11xF6ZNL5 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh11xF6ZNL5 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Pcdh11xF6ZNL5 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh11xF6ZNL5 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh11xF6ZNL5 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh11xF6ZNL5 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
Pcdh11xF6ZNL5 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh11xF6ZNL5 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdh11xF6ZNL5 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdh11xF6ZNL5 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Pcdh11xF6ZNL5 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdh11xF6ZNL5 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
Pcdh11xF6ZNL5 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdh11xF6ZNL5 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdh11xF6ZNL5 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdh11xF6ZNL5 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Pcdh11xF6ZNL5 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdh11xF6ZNL5 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdh11xF6ZNL5 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdh11xF6ZNL5 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC21.08■□□□□ 0.97
Pcdh11xF6ZNL5 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdh11xF6ZNL5 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
Pcdh11xF6ZNL5 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdh11xF6ZNL5 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdh11xF6ZNL5 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
Pcdh11xF6ZNL5 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdh11xF6ZNL5 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdh11xF6ZNL5 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC21.07■□□□□ 0.96
Pcdh11xF6ZNL5 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC21.07■□□□□ 0.96
Pcdh11xF6ZNL5 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdh11xF6ZNL5 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdh11xF6ZNL5 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdh11xF6ZNL5 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdh11xF6ZNL5 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdh11xF6ZNL5 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdh11xF6ZNL5 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC21.06■□□□□ 0.96
Pcdh11xF6ZNL5 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdh11xF6ZNL5 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdh11xF6ZNL5 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Pcdh11xF6ZNL5 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdh11xF6ZNL5 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdh11xF6ZNL5 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdh11xF6ZNL5 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdh11xF6ZNL5 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdh11xF6ZNL5 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdh11xF6ZNL5 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
Pcdh11xF6ZNL5 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdh11xF6ZNL5 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Pcdh11xF6ZNL5 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdh11xF6ZNL5 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdh11xF6ZNL5 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdh11xF6ZNL5 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdh11xF6ZNL5 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdh11xF6ZNL5 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC21.05■□□□□ 0.96
Pcdh11xF6ZNL5 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdh11xF6ZNL5 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdh11xF6ZNL5 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdh11xF6ZNL5 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdh11xF6ZNL5 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC21.05■□□□□ 0.96
Pcdh11xF6ZNL5 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Pcdh11xF6ZNL5 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
Pcdh11xF6ZNL5 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdh11xF6ZNL5 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdh11xF6ZNL5 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdh11xF6ZNL5 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdh11xF6ZNL5 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdh11xF6ZNL5 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdh11xF6ZNL5 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdh11xF6ZNL5 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.04■□□□□ 0.96
Pcdh11xF6ZNL5 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Pcdh11xF6ZNL5 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Pcdh11xF6ZNL5 Rncr4-201ENSMUST00000194541 2234 ntBASIC21.04■□□□□ 0.96
Pcdh11xF6ZNL5 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.04■□□□□ 0.96
Pcdh11xF6ZNL5 Gm14281-201ENSMUST00000121700 1294 ntBASIC21.04■□□□□ 0.96
Pcdh11xF6ZNL5 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.04■□□□□ 0.96
Pcdh11xF6ZNL5 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC21.04■□□□□ 0.96
Pcdh11xF6ZNL5 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdh11xF6ZNL5 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdh11xF6ZNL5 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Pcdh11xF6ZNL5 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Pcdh11xF6ZNL5 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms