Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc149F6V035 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc149F6V035 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc149F6V035 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc149F6V035 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
Ccdc149F6V035 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc149F6V035 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ccdc149F6V035 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.34■□□□□ 0.69
Ccdc149F6V035 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc149F6V035 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc149F6V035 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Ccdc149F6V035 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc149F6V035 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc149F6V035 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc149F6V035 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc149F6V035 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc149F6V035 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Ccdc149F6V035 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc149F6V035 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc149F6V035 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc149F6V035 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc149F6V035 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc149F6V035 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc149F6V035 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc149F6V035 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc149F6V035 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ccdc149F6V035 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.32■□□□□ 0.68
Ccdc149F6V035 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc149F6V035 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ccdc149F6V035 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc149F6V035 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.32■□□□□ 0.68
Ccdc149F6V035 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc149F6V035 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc149F6V035 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc149F6V035 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc149F6V035 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc149F6V035 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc149F6V035 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc149F6V035 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Ccdc149F6V035 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc149F6V035 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc149F6V035 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc149F6V035 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Ccdc149F6V035 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc149F6V035 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc149F6V035 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.31■□□□□ 0.68
Ccdc149F6V035 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.31■□□□□ 0.68
Ccdc149F6V035 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Ccdc149F6V035 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.31■□□□□ 0.68
Ccdc149F6V035 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Ccdc149F6V035 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.31■□□□□ 0.68
Ccdc149F6V035 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc149F6V035 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Ccdc149F6V035 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Ccdc149F6V035 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc149F6V035 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
Ccdc149F6V035 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc149F6V035 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Ccdc149F6V035 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc149F6V035 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Ccdc149F6V035 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc149F6V035 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc149F6V035 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Ccdc149F6V035 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc149F6V035 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc149F6V035 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc149F6V035 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc149F6V035 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc149F6V035 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.29■□□□□ 0.68
Ccdc149F6V035 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc149F6V035 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.29■□□□□ 0.68
Ccdc149F6V035 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc149F6V035 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc149F6V035 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc149F6V035 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc149F6V035 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Ccdc149F6V035 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.28■□□□□ 0.68
Ccdc149F6V035 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc149F6V035 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc149F6V035 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc149F6V035 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Ccdc149F6V035 Gm20760-201ENSMUST00000179197 648 ntBASIC19.28■□□□□ 0.68
Ccdc149F6V035 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc149F6V035 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Ccdc149F6V035 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc149F6V035 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc149F6V035 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Ccdc149F6V035 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ccdc149F6V035 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Ccdc149F6V035 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc149F6V035 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc149F6V035 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Ccdc149F6V035 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Ccdc149F6V035 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
Ccdc149F6V035 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.27■□□□□ 0.68
Ccdc149F6V035 Gm10653-202ENSMUST00000139570 835 ntBASIC19.27■□□□□ 0.68
Ccdc149F6V035 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ccdc149F6V035 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.27■□□□□ 0.68
Ccdc149F6V035 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.27■□□□□ 0.68
Ccdc149F6V035 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms