Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.17■□□□□ 0.34
Gm3543D3Z235 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm3543D3Z235 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm3543D3Z235 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm3543D3Z235 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm3543D3Z235 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Gm3543D3Z235 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Gm3543D3Z235 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC17.16■□□□□ 0.34
Gm3543D3Z235 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm3543D3Z235 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Gm3543D3Z235 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm3543D3Z235 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm3543D3Z235 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm3543D3Z235 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm3543D3Z235 Gm18671-201ENSMUST00000214826 683 ntBASIC17.16■□□□□ 0.34
Gm3543D3Z235 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm3543D3Z235 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm3543D3Z235 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
Gm3543D3Z235 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Gm3543D3Z235 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.16■□□□□ 0.34
Gm3543D3Z235 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm3543D3Z235 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm3543D3Z235 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Gm3543D3Z235 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3543D3Z235 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Gm3543D3Z235 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3543D3Z235 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3543D3Z235 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Gm3543D3Z235 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3543D3Z235 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3543D3Z235 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.15■□□□□ 0.34
Gm3543D3Z235 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3543D3Z235 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3543D3Z235 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3543D3Z235 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Gm3543D3Z235 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
Gm3543D3Z235 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Gm3543D3Z235 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Gm3543D3Z235 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3543D3Z235 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.14■□□□□ 0.33
Gm3543D3Z235 Gm42569-201ENSMUST00000200539 472 ntBASIC17.14■□□□□ 0.33
Gm3543D3Z235 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3543D3Z235 Gm9988-201ENSMUST00000069786 435 ntBASIC17.14■□□□□ 0.33
Gm3543D3Z235 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Gm3543D3Z235 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm3543D3Z235 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm3543D3Z235 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm3543D3Z235 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.13■□□□□ 0.33
Gm3543D3Z235 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.13■□□□□ 0.33
Gm3543D3Z235 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm3543D3Z235 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm3543D3Z235 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Gm3543D3Z235 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Gm3543D3Z235 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Gm3543D3Z235 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm3543D3Z235 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm3543D3Z235 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm3543D3Z235 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm3543D3Z235 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Gm3543D3Z235 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Gm3543D3Z235 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm3543D3Z235 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.12■□□□□ 0.33
Gm3543D3Z235 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.12■□□□□ 0.33
Gm3543D3Z235 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.12■□□□□ 0.33
Gm3543D3Z235 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Gm3543D3Z235 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.11■□□□□ 0.33
Gm3543D3Z235 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3543D3Z235 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3543D3Z235 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3543D3Z235 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3543D3Z235 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3543D3Z235 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3543D3Z235 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3543D3Z235 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3543D3Z235 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.11■□□□□ 0.33
Gm3543D3Z235 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3543D3Z235 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3543D3Z235 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3543D3Z235 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3543D3Z235 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Gm3543D3Z235 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Gm3543D3Z235 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3543D3Z235 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3543D3Z235 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3543D3Z235 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.1■□□□□ 0.33
Gm3543D3Z235 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3543D3Z235 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3543D3Z235 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
Gm3543D3Z235 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Gm3543D3Z235 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3543D3Z235 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Gm3543D3Z235 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Gm3543D3Z235 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm3543D3Z235 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm3543D3Z235 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.09■□□□□ 0.33
Gm3543D3Z235 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.09■□□□□ 0.33
Gm3543D3Z235 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm3543D3Z235 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Gm3543D3Z235 AA386476-201ENSMUST00000098781 1665 ntBASIC17.09■□□□□ 0.33
Gm3543D3Z235 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms