Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Shank1D3YZU1 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Shank1D3YZU1 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Shank1D3YZU1 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC17.05■□□□□ 0.32
Shank1D3YZU1 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Shank1D3YZU1 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Shank1D3YZU1 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Shank1D3YZU1 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shank1D3YZU1 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shank1D3YZU1 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Shank1D3YZU1 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shank1D3YZU1 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Shank1D3YZU1 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shank1D3YZU1 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shank1D3YZU1 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shank1D3YZU1 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Shank1D3YZU1 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Shank1D3YZU1 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Shank1D3YZU1 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Shank1D3YZU1 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shank1D3YZU1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shank1D3YZU1 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shank1D3YZU1 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shank1D3YZU1 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shank1D3YZU1 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shank1D3YZU1 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Shank1D3YZU1 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Shank1D3YZU1 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.04■□□□□ 0.32
Shank1D3YZU1 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Shank1D3YZU1 Gm10698-201ENSMUST00000182663 604 ntBASIC17.04■□□□□ 0.32
Shank1D3YZU1 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.04■□□□□ 0.32
Shank1D3YZU1 Gm2559-201ENSMUST00000201323 363 ntBASIC17.04■□□□□ 0.32
Shank1D3YZU1 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.04■□□□□ 0.32
Shank1D3YZU1 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Shank1D3YZU1 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shank1D3YZU1 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.03■□□□□ 0.32
Shank1D3YZU1 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.03■□□□□ 0.32
Shank1D3YZU1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shank1D3YZU1 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Shank1D3YZU1 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Shank1D3YZU1 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.03■□□□□ 0.32
Shank1D3YZU1 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shank1D3YZU1 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shank1D3YZU1 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shank1D3YZU1 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.03■□□□□ 0.32
Shank1D3YZU1 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Shank1D3YZU1 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Shank1D3YZU1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shank1D3YZU1 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shank1D3YZU1 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Shank1D3YZU1 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Shank1D3YZU1 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Shank1D3YZU1 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Shank1D3YZU1 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Shank1D3YZU1 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Shank1D3YZU1 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Shank1D3YZU1 Gm11643-201ENSMUST00000119578 864 ntBASIC17.02■□□□□ 0.31
Shank1D3YZU1 Gm7860-201ENSMUST00000121190 879 ntBASIC17.02■□□□□ 0.31
Shank1D3YZU1 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Shank1D3YZU1 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC17.02■□□□□ 0.31
Shank1D3YZU1 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Shank1D3YZU1 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Shank1D3YZU1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Shank1D3YZU1 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Shank1D3YZU1 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Shank1D3YZU1 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Shank1D3YZU1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Shank1D3YZU1 AA386476-201ENSMUST00000098781 1665 ntBASIC17.01■□□□□ 0.31
Shank1D3YZU1 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shank1D3YZU1 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Shank1D3YZU1 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shank1D3YZU1 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
Shank1D3YZU1 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Shank1D3YZU1 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shank1D3YZU1 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Shank1D3YZU1 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Shank1D3YZU1 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.01■□□□□ 0.31
Shank1D3YZU1 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Shank1D3YZU1 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Shank1D3YZU1 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17■□□□□ 0.31
Shank1D3YZU1 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Shank1D3YZU1 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Shank1D3YZU1 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shank1D3YZU1 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shank1D3YZU1 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shank1D3YZU1 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Shank1D3YZU1 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shank1D3YZU1 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
Shank1D3YZU1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shank1D3YZU1 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shank1D3YZU1 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Shank1D3YZU1 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shank1D3YZU1 Mir1199-201ENSMUST00000117015 119 ntBASIC16.99■□□□□ 0.31
Shank1D3YZU1 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Shank1D3YZU1 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.99■□□□□ 0.31
Shank1D3YZU1 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.99■□□□□ 0.31
Shank1D3YZU1 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.99■□□□□ 0.31
Shank1D3YZU1 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Shank1D3YZU1 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Shank1D3YZU1 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms