Protein–RNA interactions for Protein: D3YYI8

Gm10093, Histone deacetylase, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10093D3YYI8 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Gm10093D3YYI8 Gm12922-201ENSMUST00000120626 809 ntBASIC22.73■■□□□ 1.23
Gm10093D3YYI8 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Gm10093D3YYI8 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC22.73■■□□□ 1.23
Gm10093D3YYI8 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Gm10093D3YYI8 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
Gm10093D3YYI8 Gm43182-201ENSMUST00000199476 2528 ntBASIC22.73■■□□□ 1.23
Gm10093D3YYI8 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Gm10093D3YYI8 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Gm10093D3YYI8 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Gm10093D3YYI8 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Gm10093D3YYI8 Rarb-207ENSMUST00000225921 2756 ntBASIC22.72■■□□□ 1.23
Gm10093D3YYI8 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Gm10093D3YYI8 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Gm10093D3YYI8 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC22.72■■□□□ 1.23
Gm10093D3YYI8 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
Gm10093D3YYI8 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC22.72■■□□□ 1.23
Gm10093D3YYI8 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC22.72■■□□□ 1.23
Gm10093D3YYI8 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Gm10093D3YYI8 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Gm10093D3YYI8 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Gm10093D3YYI8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
Gm10093D3YYI8 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Gm10093D3YYI8 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Gm10093D3YYI8 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Gm10093D3YYI8 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Gm10093D3YYI8 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Gm10093D3YYI8 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Gm10093D3YYI8 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Gm10093D3YYI8 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
Gm10093D3YYI8 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Gm10093D3YYI8 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Gm10093D3YYI8 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.23
Gm10093D3YYI8 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC22.7■■□□□ 1.23
Gm10093D3YYI8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Gm10093D3YYI8 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Gm10093D3YYI8 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Gm10093D3YYI8 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Gm10093D3YYI8 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Gm10093D3YYI8 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Gm10093D3YYI8 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Gm10093D3YYI8 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Gm10093D3YYI8 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC22.69■■□□□ 1.22
Gm10093D3YYI8 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
Gm10093D3YYI8 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Gm10093D3YYI8 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Gm10093D3YYI8 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Gm10093D3YYI8 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Gm10093D3YYI8 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Gm10093D3YYI8 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Gm10093D3YYI8 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC22.69■■□□□ 1.22
Gm10093D3YYI8 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Gm10093D3YYI8 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Gm10093D3YYI8 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Gm10093D3YYI8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Gm10093D3YYI8 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Gm10093D3YYI8 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC22.68■■□□□ 1.22
Gm10093D3YYI8 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC22.68■■□□□ 1.22
Gm10093D3YYI8 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Gm10093D3YYI8 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Gm10093D3YYI8 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Gm10093D3YYI8 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Gm10093D3YYI8 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC22.68■■□□□ 1.22
Gm10093D3YYI8 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Gm10093D3YYI8 Gm9207-201ENSMUST00000198773 1115 ntBASIC22.67■■□□□ 1.22
Gm10093D3YYI8 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Gm10093D3YYI8 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Gm10093D3YYI8 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC22.67■■□□□ 1.22
Gm10093D3YYI8 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
Gm10093D3YYI8 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Gm10093D3YYI8 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC22.67■■□□□ 1.22
Gm10093D3YYI8 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Gm10093D3YYI8 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC22.67■■□□□ 1.22
Gm10093D3YYI8 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Gm10093D3YYI8 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
Gm10093D3YYI8 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Gm10093D3YYI8 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Gm10093D3YYI8 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Gm10093D3YYI8 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Gm10093D3YYI8 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Gm10093D3YYI8 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Gm10093D3YYI8 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC22.66■■□□□ 1.22
Gm10093D3YYI8 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Gm10093D3YYI8 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC22.65■■□□□ 1.22
Gm10093D3YYI8 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Gm10093D3YYI8 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Gm10093D3YYI8 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Gm10093D3YYI8 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC22.65■■□□□ 1.22
Gm10093D3YYI8 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Gm10093D3YYI8 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Gm10093D3YYI8 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC22.64■■□□□ 1.22
Gm10093D3YYI8 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Gm10093D3YYI8 Rps24-207ENSMUST00000224568 714 ntBASIC22.64■■□□□ 1.21
Gm10093D3YYI8 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
Gm10093D3YYI8 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC22.64■■□□□ 1.21
Gm10093D3YYI8 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Gm10093D3YYI8 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Gm10093D3YYI8 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Gm10093D3YYI8 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Gm10093D3YYI8 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms