Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trim30cD3YVI9 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim30cD3YVI9 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim30cD3YVI9 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
Trim30cD3YVI9 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim30cD3YVI9 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim30cD3YVI9 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trim30cD3YVI9 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim30cD3YVI9 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trim30cD3YVI9 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trim30cD3YVI9 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim30cD3YVI9 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC20.68■□□□□ 0.9
Trim30cD3YVI9 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Trim30cD3YVI9 Gm43017-201ENSMUST00000198296 752 ntBASIC20.68■□□□□ 0.9
Trim30cD3YVI9 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim30cD3YVI9 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim30cD3YVI9 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Trim30cD3YVI9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trim30cD3YVI9 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Trim30cD3YVI9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim30cD3YVI9 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Trim30cD3YVI9 Gm43173-201ENSMUST00000202246 593 ntBASIC20.67■□□□□ 0.9
Trim30cD3YVI9 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim30cD3YVI9 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim30cD3YVI9 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.67■□□□□ 0.9
Trim30cD3YVI9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim30cD3YVI9 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim30cD3YVI9 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.67■□□□□ 0.9
Trim30cD3YVI9 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.67■□□□□ 0.9
Trim30cD3YVI9 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trim30cD3YVI9 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Trim30cD3YVI9 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim30cD3YVI9 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trim30cD3YVI9 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.66■□□□□ 0.9
Trim30cD3YVI9 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
Trim30cD3YVI9 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.66■□□□□ 0.9
Trim30cD3YVI9 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.66■□□□□ 0.9
Trim30cD3YVI9 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim30cD3YVI9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim30cD3YVI9 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trim30cD3YVI9 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Trim30cD3YVI9 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Trim30cD3YVI9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.65■□□□□ 0.9
Trim30cD3YVI9 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim30cD3YVI9 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim30cD3YVI9 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim30cD3YVI9 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim30cD3YVI9 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim30cD3YVI9 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Trim30cD3YVI9 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Trim30cD3YVI9 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Trim30cD3YVI9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.65■□□□□ 0.9
Trim30cD3YVI9 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim30cD3YVI9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trim30cD3YVI9 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Trim30cD3YVI9 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Trim30cD3YVI9 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC20.65■□□□□ 0.9
Trim30cD3YVI9 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim30cD3YVI9 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.64■□□□□ 0.9
Trim30cD3YVI9 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trim30cD3YVI9 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.64■□□□□ 0.9
Trim30cD3YVI9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim30cD3YVI9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trim30cD3YVI9 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim30cD3YVI9 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.64■□□□□ 0.89
Trim30cD3YVI9 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim30cD3YVI9 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Trim30cD3YVI9 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Trim30cD3YVI9 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim30cD3YVI9 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim30cD3YVI9 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Trim30cD3YVI9 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trim30cD3YVI9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim30cD3YVI9 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.63■□□□□ 0.89
Trim30cD3YVI9 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.63■□□□□ 0.89
Trim30cD3YVI9 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.63■□□□□ 0.89
Trim30cD3YVI9 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.63■□□□□ 0.89
Trim30cD3YVI9 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim30cD3YVI9 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim30cD3YVI9 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim30cD3YVI9 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim30cD3YVI9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim30cD3YVI9 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim30cD3YVI9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim30cD3YVI9 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.63■□□□□ 0.89
Trim30cD3YVI9 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.63■□□□□ 0.89
Trim30cD3YVI9 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trim30cD3YVI9 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trim30cD3YVI9 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim30cD3YVI9 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim30cD3YVI9 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim30cD3YVI9 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim30cD3YVI9 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim30cD3YVI9 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim30cD3YVI9 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim30cD3YVI9 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim30cD3YVI9 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim30cD3YVI9 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trim30cD3YVI9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trim30cD3YVI9 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms