Protein–RNA interactions for Protein: D3YV89

Mmp27, Matrix metalloproteinase, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp27D3YV89 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Mmp27D3YV89 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Mmp27D3YV89 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC16.06■□□□□ 0.16
Mmp27D3YV89 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Mmp27D3YV89 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp27D3YV89 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp27D3YV89 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp27D3YV89 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp27D3YV89 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Mmp27D3YV89 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC16.05■□□□□ 0.16
Mmp27D3YV89 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp27D3YV89 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp27D3YV89 Golgb1-201ENSMUST00000023534 498 ntBASIC16.05■□□□□ 0.16
Mmp27D3YV89 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp27D3YV89 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp27D3YV89 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp27D3YV89 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp27D3YV89 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.05■□□□□ 0.16
Mmp27D3YV89 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp27D3YV89 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp27D3YV89 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp27D3YV89 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Mmp27D3YV89 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Mmp27D3YV89 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp27D3YV89 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
Mmp27D3YV89 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.04■□□□□ 0.16
Mmp27D3YV89 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp27D3YV89 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp27D3YV89 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp27D3YV89 Gm7143-201ENSMUST00000222811 859 ntBASIC16.04■□□□□ 0.16
Mmp27D3YV89 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp27D3YV89 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Mmp27D3YV89 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.04■□□□□ 0.16
Mmp27D3YV89 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Mmp27D3YV89 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp27D3YV89 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp27D3YV89 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC16.03■□□□□ 0.16
Mmp27D3YV89 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp27D3YV89 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp27D3YV89 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Mmp27D3YV89 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Mmp27D3YV89 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp27D3YV89 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Mmp27D3YV89 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp27D3YV89 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC16.03■□□□□ 0.16
Mmp27D3YV89 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.03■□□□□ 0.16
Mmp27D3YV89 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.03■□□□□ 0.16
Mmp27D3YV89 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Mmp27D3YV89 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp27D3YV89 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp27D3YV89 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp27D3YV89 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Mmp27D3YV89 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Mmp27D3YV89 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Mmp27D3YV89 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Mmp27D3YV89 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
Mmp27D3YV89 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Mmp27D3YV89 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Mmp27D3YV89 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Mmp27D3YV89 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Mmp27D3YV89 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Mmp27D3YV89 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.02■□□□□ 0.16
Mmp27D3YV89 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Mmp27D3YV89 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Mmp27D3YV89 Fst-202ENSMUST00000223640 2612 ntBASIC16.02■□□□□ 0.15
Mmp27D3YV89 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Mmp27D3YV89 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Mmp27D3YV89 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Mmp27D3YV89 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
Mmp27D3YV89 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Mmp27D3YV89 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Mmp27D3YV89 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.01■□□□□ 0.15
Mmp27D3YV89 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Mmp27D3YV89 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Mmp27D3YV89 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC16.01■□□□□ 0.15
Mmp27D3YV89 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC16.01■□□□□ 0.15
Mmp27D3YV89 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Mmp27D3YV89 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Mmp27D3YV89 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Mmp27D3YV89 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Mmp27D3YV89 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Mmp27D3YV89 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Mmp27D3YV89 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Mmp27D3YV89 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
Mmp27D3YV89 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Mmp27D3YV89 Gm42939-201ENSMUST00000197514 2205 ntBASIC16■□□□□ 0.15
Mmp27D3YV89 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Mmp27D3YV89 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Mmp27D3YV89 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Mmp27D3YV89 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC16■□□□□ 0.15
Mmp27D3YV89 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16■□□□□ 0.15
Mmp27D3YV89 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
Mmp27D3YV89 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Mmp27D3YV89 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16■□□□□ 0.15
Mmp27D3YV89 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Mmp27D3YV89 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16■□□□□ 0.15
Mmp27D3YV89 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC16■□□□□ 0.15
Mmp27D3YV89 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Mmp27D3YV89 Gm37811-201ENSMUST00000192416 2601 ntBASIC16■□□□□ 0.15
Mmp27D3YV89 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms