Protein–RNA interactions for Protein: B2RS91

Rrn3, RNA polymerase I-specific transcription initiation factor RRN3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrn3B2RS91 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rrn3B2RS91 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Rrn3B2RS91 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
Rrn3B2RS91 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Rrn3B2RS91 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.1■□□□□ 0.65
Rrn3B2RS91 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Rrn3B2RS91 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.1■□□□□ 0.65
Rrn3B2RS91 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.1■□□□□ 0.65
Rrn3B2RS91 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rrn3B2RS91 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rrn3B2RS91 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rrn3B2RS91 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rrn3B2RS91 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rrn3B2RS91 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rrn3B2RS91 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rrn3B2RS91 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rrn3B2RS91 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rrn3B2RS91 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.09■□□□□ 0.65
Rrn3B2RS91 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rrn3B2RS91 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rrn3B2RS91 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rrn3B2RS91 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.09■□□□□ 0.65
Rrn3B2RS91 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rrn3B2RS91 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
Rrn3B2RS91 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.09■□□□□ 0.65
Rrn3B2RS91 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rrn3B2RS91 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rrn3B2RS91 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rrn3B2RS91 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Rrn3B2RS91 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.08■□□□□ 0.65
Rrn3B2RS91 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Rrn3B2RS91 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Rrn3B2RS91 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.08■□□□□ 0.64
Rrn3B2RS91 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.08■□□□□ 0.64
Rrn3B2RS91 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rrn3B2RS91 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.08■□□□□ 0.64
Rrn3B2RS91 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Rrn3B2RS91 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rrn3B2RS91 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Rrn3B2RS91 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.07■□□□□ 0.64
Rrn3B2RS91 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rrn3B2RS91 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rrn3B2RS91 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rrn3B2RS91 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rrn3B2RS91 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rrn3B2RS91 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rrn3B2RS91 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rrn3B2RS91 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Rrn3B2RS91 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Rrn3B2RS91 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.07■□□□□ 0.64
Rrn3B2RS91 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rrn3B2RS91 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rrn3B2RS91 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rrn3B2RS91 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Rrn3B2RS91 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rrn3B2RS91 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rrn3B2RS91 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Rrn3B2RS91 Gm13234-201ENSMUST00000120010 747 ntBASIC19.06■□□□□ 0.64
Rrn3B2RS91 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.06■□□□□ 0.64
Rrn3B2RS91 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rrn3B2RS91 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rrn3B2RS91 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.06■□□□□ 0.64
Rrn3B2RS91 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Rrn3B2RS91 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rrn3B2RS91 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rrn3B2RS91 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Rrn3B2RS91 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Rrn3B2RS91 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rrn3B2RS91 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rrn3B2RS91 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rrn3B2RS91 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Rrn3B2RS91 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Rrn3B2RS91 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Rrn3B2RS91 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rrn3B2RS91 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rrn3B2RS91 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Rrn3B2RS91 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Rrn3B2RS91 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rrn3B2RS91 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rrn3B2RS91 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.04■□□□□ 0.64
Rrn3B2RS91 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rrn3B2RS91 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
Rrn3B2RS91 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Rrn3B2RS91 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Rrn3B2RS91 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
Rrn3B2RS91 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rrn3B2RS91 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rrn3B2RS91 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Rrn3B2RS91 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rrn3B2RS91 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rrn3B2RS91 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rrn3B2RS91 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rrn3B2RS91 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rrn3B2RS91 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rrn3B2RS91 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rrn3B2RS91 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rrn3B2RS91 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rrn3B2RS91 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.03■□□□□ 0.64
Rrn3B2RS91 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Rrn3B2RS91 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 81.7 ms