Protein–RNA interactions for Protein: A6H6S0

Herc3, Hect domain and RLD 3, mousemouse

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc3A6H6S0 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Herc3A6H6S0 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Herc3A6H6S0 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Herc3A6H6S0 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Herc3A6H6S0 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Herc3A6H6S0 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Herc3A6H6S0 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Herc3A6H6S0 Rncr4-201ENSMUST00000194541 2234 ntBASIC21.08■□□□□ 0.97
Herc3A6H6S0 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.08■□□□□ 0.97
Herc3A6H6S0 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Herc3A6H6S0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC21.08■□□□□ 0.97
Herc3A6H6S0 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC21.08■□□□□ 0.97
Herc3A6H6S0 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Herc3A6H6S0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Herc3A6H6S0 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Herc3A6H6S0 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Herc3A6H6S0 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Herc3A6H6S0 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Herc3A6H6S0 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Herc3A6H6S0 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Herc3A6H6S0 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Herc3A6H6S0 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Herc3A6H6S0 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Herc3A6H6S0 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Herc3A6H6S0 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
Herc3A6H6S0 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Herc3A6H6S0 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Herc3A6H6S0 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Herc3A6H6S0 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Herc3A6H6S0 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Herc3A6H6S0 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Herc3A6H6S0 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Herc3A6H6S0 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Herc3A6H6S0 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Herc3A6H6S0 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC21.06■□□□□ 0.96
Herc3A6H6S0 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Herc3A6H6S0 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.06■□□□□ 0.96
Herc3A6H6S0 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Herc3A6H6S0 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Herc3A6H6S0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Herc3A6H6S0 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Herc3A6H6S0 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Herc3A6H6S0 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Herc3A6H6S0 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Herc3A6H6S0 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Herc3A6H6S0 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Herc3A6H6S0 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Herc3A6H6S0 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Herc3A6H6S0 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Herc3A6H6S0 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC21.05■□□□□ 0.96
Herc3A6H6S0 Gm5112-201ENSMUST00000204407 2368 ntBASIC21.04■□□□□ 0.96
Herc3A6H6S0 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Herc3A6H6S0 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Herc3A6H6S0 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
Herc3A6H6S0 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Herc3A6H6S0 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Herc3A6H6S0 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Herc3A6H6S0 Gm14281-201ENSMUST00000121700 1294 ntBASIC21.04■□□□□ 0.96
Herc3A6H6S0 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Herc3A6H6S0 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Herc3A6H6S0 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Herc3A6H6S0 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Herc3A6H6S0 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Herc3A6H6S0 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Herc3A6H6S0 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.04■□□□□ 0.96
Herc3A6H6S0 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Herc3A6H6S0 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Herc3A6H6S0 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.04■□□□□ 0.96
Herc3A6H6S0 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Herc3A6H6S0 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Herc3A6H6S0 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Herc3A6H6S0 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Herc3A6H6S0 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.03■□□□□ 0.96
Herc3A6H6S0 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.03■□□□□ 0.96
Herc3A6H6S0 Gm43060-201ENSMUST00000200621 289 ntBASIC21.03■□□□□ 0.96
Herc3A6H6S0 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Herc3A6H6S0 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC21.02■□□□□ 0.96
Herc3A6H6S0 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Herc3A6H6S0 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Herc3A6H6S0 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC21.02■□□□□ 0.96
Herc3A6H6S0 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21.02■□□□□ 0.96
Herc3A6H6S0 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Herc3A6H6S0 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Herc3A6H6S0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Herc3A6H6S0 Gm9885-202ENSMUST00000186234 2209 ntBASIC21.02■□□□□ 0.96
Herc3A6H6S0 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Herc3A6H6S0 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Herc3A6H6S0 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Herc3A6H6S0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Herc3A6H6S0 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Herc3A6H6S0 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC21.01■□□□□ 0.95
Herc3A6H6S0 Gm2011-201ENSMUST00000203124 1263 ntBASIC21.01■□□□□ 0.95
Herc3A6H6S0 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Herc3A6H6S0 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Herc3A6H6S0 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Herc3A6H6S0 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC21.01■□□□□ 0.95
Herc3A6H6S0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Herc3A6H6S0 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC21■□□□□ 0.95
Herc3A6H6S0 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC21■□□□□ 0.95
Herc3A6H6S0 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms