Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a5A6H584 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.56□□□□□ -0.08
Col6a5A6H584 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.56□□□□□ -0.08
Col6a5A6H584 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a5A6H584 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a5A6H584 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a5A6H584 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a5A6H584 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Col6a5A6H584 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC14.55□□□□□ -0.08
Col6a5A6H584 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Col6a5A6H584 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a5A6H584 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.55□□□□□ -0.08
Col6a5A6H584 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a5A6H584 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a5A6H584 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a5A6H584 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a5A6H584 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a5A6H584 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a5A6H584 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a5A6H584 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a5A6H584 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Col6a5A6H584 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Col6a5A6H584 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a5A6H584 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a5A6H584 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a5A6H584 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a5A6H584 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a5A6H584 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a5A6H584 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.54□□□□□ -0.08
Col6a5A6H584 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a5A6H584 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Col6a5A6H584 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a5A6H584 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Col6a5A6H584 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.54□□□□□ -0.08
Col6a5A6H584 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a5A6H584 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a5A6H584 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a5A6H584 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Col6a5A6H584 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a5A6H584 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a5A6H584 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a5A6H584 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Col6a5A6H584 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Col6a5A6H584 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a5A6H584 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a5A6H584 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Col6a5A6H584 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Col6a5A6H584 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col6a5A6H584 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Col6a5A6H584 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col6a5A6H584 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col6a5A6H584 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col6a5A6H584 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Col6a5A6H584 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a5A6H584 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a5A6H584 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a5A6H584 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Col6a5A6H584 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a5A6H584 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Col6a5A6H584 AC153962.1-201ENSMUST00000218530 1948 ntBASIC14.52□□□□□ -0.09
Col6a5A6H584 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC14.51□□□□□ -0.09
Col6a5A6H584 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
Col6a5A6H584 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a5A6H584 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.51□□□□□ -0.09
Col6a5A6H584 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC14.51□□□□□ -0.09
Col6a5A6H584 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a5A6H584 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
Col6a5A6H584 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a5A6H584 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a5A6H584 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.51□□□□□ -0.09
Col6a5A6H584 Umpk-ps-201ENSMUST00000211897 827 ntBASIC14.51□□□□□ -0.09
Col6a5A6H584 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a5A6H584 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Col6a5A6H584 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a5A6H584 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a5A6H584 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a5A6H584 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a5A6H584 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a5A6H584 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a5A6H584 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a5A6H584 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Col6a5A6H584 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a5A6H584 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a5A6H584 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a5A6H584 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a5A6H584 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Col6a5A6H584 Gm18032-201ENSMUST00000222541 538 ntBASIC14.49□□□□□ -0.09
Col6a5A6H584 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a5A6H584 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a5A6H584 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a5A6H584 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a5A6H584 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a5A6H584 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a5A6H584 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a5A6H584 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a5A6H584 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
Col6a5A6H584 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Col6a5A6H584 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Col6a5A6H584 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Col6a5A6H584 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms