Protein–RNA interactions for Protein: A3KG49

Gm5640, Predicted gene 5640, mousemouse

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5640A3KG49 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm5640A3KG49 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Gm5640A3KG49 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm5640A3KG49 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Gm5640A3KG49 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm5640A3KG49 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.34■□□□□ 0.69
Gm5640A3KG49 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm5640A3KG49 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm5640A3KG49 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.34■□□□□ 0.69
Gm5640A3KG49 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm5640A3KG49 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.34■□□□□ 0.69
Gm5640A3KG49 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm5640A3KG49 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm5640A3KG49 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.34■□□□□ 0.69
Gm5640A3KG49 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm5640A3KG49 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Gm5640A3KG49 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.34■□□□□ 0.69
Gm5640A3KG49 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gm5640A3KG49 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gm5640A3KG49 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gm5640A3KG49 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.33■□□□□ 0.69
Gm5640A3KG49 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Gm5640A3KG49 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Gm5640A3KG49 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm5640A3KG49 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm5640A3KG49 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm5640A3KG49 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Gm5640A3KG49 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm5640A3KG49 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm5640A3KG49 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm5640A3KG49 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm5640A3KG49 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm5640A3KG49 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm5640A3KG49 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.32■□□□□ 0.68
Gm5640A3KG49 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm5640A3KG49 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm5640A3KG49 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Gm5640A3KG49 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm5640A3KG49 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Gm5640A3KG49 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Gm5640A3KG49 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm5640A3KG49 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Gm5640A3KG49 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Gm5640A3KG49 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Gm5640A3KG49 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm5640A3KG49 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.31■□□□□ 0.68
Gm5640A3KG49 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm5640A3KG49 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm5640A3KG49 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC19.31■□□□□ 0.68
Gm5640A3KG49 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Gm5640A3KG49 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm5640A3KG49 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Gm5640A3KG49 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Gm5640A3KG49 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm5640A3KG49 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm5640A3KG49 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm5640A3KG49 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm5640A3KG49 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Gm5640A3KG49 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm5640A3KG49 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Gm5640A3KG49 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm5640A3KG49 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Gm5640A3KG49 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Gm5640A3KG49 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm5640A3KG49 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.3■□□□□ 0.68
Gm5640A3KG49 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm5640A3KG49 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm5640A3KG49 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Gm5640A3KG49 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm5640A3KG49 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Gm5640A3KG49 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Gm5640A3KG49 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Gm5640A3KG49 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm5640A3KG49 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm5640A3KG49 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm5640A3KG49 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Gm5640A3KG49 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Gm5640A3KG49 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm5640A3KG49 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Gm5640A3KG49 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm5640A3KG49 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Gm5640A3KG49 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm5640A3KG49 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Gm5640A3KG49 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm5640A3KG49 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.28■□□□□ 0.68
Gm5640A3KG49 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Gm5640A3KG49 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm5640A3KG49 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm5640A3KG49 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Gm5640A3KG49 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm5640A3KG49 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Gm5640A3KG49 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm5640A3KG49 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm5640A3KG49 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Gm5640A3KG49 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm5640A3KG49 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.27■□□□□ 0.68
Gm5640A3KG49 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm5640A3KG49 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm5640A3KG49 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Gm5640A3KG49 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms