Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
Lnp1A0A1B0GSK3 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lnp1A0A1B0GSK3 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lnp1A0A1B0GSK3 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lnp1A0A1B0GSK3 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC15.83■□□□□ 0.12
Lnp1A0A1B0GSK3 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC15.83■□□□□ 0.12
Lnp1A0A1B0GSK3 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lnp1A0A1B0GSK3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lnp1A0A1B0GSK3 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lnp1A0A1B0GSK3 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lnp1A0A1B0GSK3 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Lnp1A0A1B0GSK3 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lnp1A0A1B0GSK3 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lnp1A0A1B0GSK3 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Lnp1A0A1B0GSK3 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lnp1A0A1B0GSK3 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lnp1A0A1B0GSK3 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lnp1A0A1B0GSK3 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Lnp1A0A1B0GSK3 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lnp1A0A1B0GSK3 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
Lnp1A0A1B0GSK3 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lnp1A0A1B0GSK3 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lnp1A0A1B0GSK3 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Lnp1A0A1B0GSK3 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Lnp1A0A1B0GSK3 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Lnp1A0A1B0GSK3 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lnp1A0A1B0GSK3 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Lnp1A0A1B0GSK3 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lnp1A0A1B0GSK3 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Lnp1A0A1B0GSK3 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Lnp1A0A1B0GSK3 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Lnp1A0A1B0GSK3 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.81■□□□□ 0.12
Lnp1A0A1B0GSK3 Gm2011-201ENSMUST00000203124 1263 ntBASIC15.81■□□□□ 0.12
Lnp1A0A1B0GSK3 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lnp1A0A1B0GSK3 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lnp1A0A1B0GSK3 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Lnp1A0A1B0GSK3 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lnp1A0A1B0GSK3 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lnp1A0A1B0GSK3 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lnp1A0A1B0GSK3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lnp1A0A1B0GSK3 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Lnp1A0A1B0GSK3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Lnp1A0A1B0GSK3 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lnp1A0A1B0GSK3 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Lnp1A0A1B0GSK3 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lnp1A0A1B0GSK3 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Lnp1A0A1B0GSK3 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lnp1A0A1B0GSK3 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lnp1A0A1B0GSK3 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC15.8■□□□□ 0.12
Lnp1A0A1B0GSK3 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lnp1A0A1B0GSK3 Cdc34b-202ENSMUST00000188741 1252 ntBASIC15.8■□□□□ 0.12
Lnp1A0A1B0GSK3 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lnp1A0A1B0GSK3 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Lnp1A0A1B0GSK3 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Lnp1A0A1B0GSK3 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lnp1A0A1B0GSK3 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lnp1A0A1B0GSK3 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lnp1A0A1B0GSK3 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lnp1A0A1B0GSK3 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Lnp1A0A1B0GSK3 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lnp1A0A1B0GSK3 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lnp1A0A1B0GSK3 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lnp1A0A1B0GSK3 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lnp1A0A1B0GSK3 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Lnp1A0A1B0GSK3 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Lnp1A0A1B0GSK3 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lnp1A0A1B0GSK3 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Lnp1A0A1B0GSK3 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Lnp1A0A1B0GSK3 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Lnp1A0A1B0GSK3 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lnp1A0A1B0GSK3 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lnp1A0A1B0GSK3 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Lnp1A0A1B0GSK3 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Lnp1A0A1B0GSK3 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Lnp1A0A1B0GSK3 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lnp1A0A1B0GSK3 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Lnp1A0A1B0GSK3 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Lnp1A0A1B0GSK3 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lnp1A0A1B0GSK3 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lnp1A0A1B0GSK3 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Lnp1A0A1B0GSK3 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lnp1A0A1B0GSK3 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lnp1A0A1B0GSK3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC15.78■□□□□ 0.12
Lnp1A0A1B0GSK3 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Lnp1A0A1B0GSK3 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Lnp1A0A1B0GSK3 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lnp1A0A1B0GSK3 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Lnp1A0A1B0GSK3 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC15.78■□□□□ 0.12
Lnp1A0A1B0GSK3 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lnp1A0A1B0GSK3 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lnp1A0A1B0GSK3 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Lnp1A0A1B0GSK3 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lnp1A0A1B0GSK3 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lnp1A0A1B0GSK3 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Lnp1A0A1B0GSK3 Golph3-205ENSMUST00000228671 2842 ntBASIC15.77■□□□□ 0.12
Lnp1A0A1B0GSK3 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.77■□□□□ 0.12
Lnp1A0A1B0GSK3 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lnp1A0A1B0GSK3 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Lnp1A0A1B0GSK3 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Lnp1A0A1B0GSK3 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms