Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Cfap99A0A140LIX9 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC22.76■■□□□ 1.23
Cfap99A0A140LIX9 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Cfap99A0A140LIX9 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC22.76■■□□□ 1.23
Cfap99A0A140LIX9 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Cfap99A0A140LIX9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
Cfap99A0A140LIX9 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Cfap99A0A140LIX9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Cfap99A0A140LIX9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Cfap99A0A140LIX9 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC22.75■■□□□ 1.23
Cfap99A0A140LIX9 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Cfap99A0A140LIX9 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC22.75■■□□□ 1.23
Cfap99A0A140LIX9 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Cfap99A0A140LIX9 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Cfap99A0A140LIX9 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Cfap99A0A140LIX9 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Cfap99A0A140LIX9 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Cfap99A0A140LIX9 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
Cfap99A0A140LIX9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Cfap99A0A140LIX9 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC22.74■■□□□ 1.23
Cfap99A0A140LIX9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Cfap99A0A140LIX9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Cfap99A0A140LIX9 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Cfap99A0A140LIX9 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Cfap99A0A140LIX9 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC22.73■■□□□ 1.23
Cfap99A0A140LIX9 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Cfap99A0A140LIX9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC22.73■■□□□ 1.23
Cfap99A0A140LIX9 Gm42555-201ENSMUST00000199304 1039 ntBASIC22.73■■□□□ 1.23
Cfap99A0A140LIX9 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
Cfap99A0A140LIX9 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Cfap99A0A140LIX9 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC22.73■■□□□ 1.23
Cfap99A0A140LIX9 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
Cfap99A0A140LIX9 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Cfap99A0A140LIX9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Cfap99A0A140LIX9 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Cfap99A0A140LIX9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
Cfap99A0A140LIX9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
Cfap99A0A140LIX9 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
Cfap99A0A140LIX9 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Cfap99A0A140LIX9 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC22.72■■□□□ 1.23
Cfap99A0A140LIX9 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Cfap99A0A140LIX9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
Cfap99A0A140LIX9 Nespas-201ENSMUST00000143738 1083 ntBASIC22.71■■□□□ 1.23
Cfap99A0A140LIX9 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC22.71■■□□□ 1.23
Cfap99A0A140LIX9 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Cfap99A0A140LIX9 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Cfap99A0A140LIX9 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Cfap99A0A140LIX9 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Cfap99A0A140LIX9 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
Cfap99A0A140LIX9 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Cfap99A0A140LIX9 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Cfap99A0A140LIX9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Cfap99A0A140LIX9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Cfap99A0A140LIX9 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Cfap99A0A140LIX9 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC22.7■■□□□ 1.22
Cfap99A0A140LIX9 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC22.7■■□□□ 1.22
Cfap99A0A140LIX9 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Cfap99A0A140LIX9 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Cfap99A0A140LIX9 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Cfap99A0A140LIX9 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cfap99A0A140LIX9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cfap99A0A140LIX9 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Cfap99A0A140LIX9 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Cfap99A0A140LIX9 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC22.69■■□□□ 1.22
Cfap99A0A140LIX9 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Cfap99A0A140LIX9 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC22.69■■□□□ 1.22
Cfap99A0A140LIX9 Gm3807-201ENSMUST00000193520 1168 ntBASIC22.69■■□□□ 1.22
Cfap99A0A140LIX9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cfap99A0A140LIX9 Gm43545-201ENSMUST00000196765 2779 ntBASIC22.69■■□□□ 1.22
Cfap99A0A140LIX9 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cfap99A0A140LIX9 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
Cfap99A0A140LIX9 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Cfap99A0A140LIX9 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
Cfap99A0A140LIX9 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC22.68■■□□□ 1.22
Cfap99A0A140LIX9 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Cfap99A0A140LIX9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cfap99A0A140LIX9 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cfap99A0A140LIX9 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
Cfap99A0A140LIX9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Cfap99A0A140LIX9 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC22.67■■□□□ 1.22
Cfap99A0A140LIX9 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Cfap99A0A140LIX9 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
Cfap99A0A140LIX9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Cfap99A0A140LIX9 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Cfap99A0A140LIX9 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Cfap99A0A140LIX9 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Cfap99A0A140LIX9 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Cfap99A0A140LIX9 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC22.66■■□□□ 1.22
Cfap99A0A140LIX9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Cfap99A0A140LIX9 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Cfap99A0A140LIX9 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Cfap99A0A140LIX9 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
Cfap99A0A140LIX9 Gm4968-201ENSMUST00000071458 858 ntBASIC22.66■■□□□ 1.22
Cfap99A0A140LIX9 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Cfap99A0A140LIX9 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Cfap99A0A140LIX9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
Cfap99A0A140LIX9 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Cfap99A0A140LIX9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Cfap99A0A140LIX9 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Cfap99A0A140LIX9 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms