Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Spcs1-204ENSMUST00000226782 949 ntBASIC18.93■□□□□ 0.62
Ccdc194A0A140LIT1 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Ccdc194A0A140LIT1 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc194A0A140LIT1 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc194A0A140LIT1 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc194A0A140LIT1 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc194A0A140LIT1 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ccdc194A0A140LIT1 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc194A0A140LIT1 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Ccdc194A0A140LIT1 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc194A0A140LIT1 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc194A0A140LIT1 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc194A0A140LIT1 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc194A0A140LIT1 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc194A0A140LIT1 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.92■□□□□ 0.62
Ccdc194A0A140LIT1 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc194A0A140LIT1 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc194A0A140LIT1 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Ccdc194A0A140LIT1 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc194A0A140LIT1 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc194A0A140LIT1 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ccdc194A0A140LIT1 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc194A0A140LIT1 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc194A0A140LIT1 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc194A0A140LIT1 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Ccdc194A0A140LIT1 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.91■□□□□ 0.62
Ccdc194A0A140LIT1 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.91■□□□□ 0.62
Ccdc194A0A140LIT1 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.91■□□□□ 0.62
Ccdc194A0A140LIT1 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.91■□□□□ 0.62
Ccdc194A0A140LIT1 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ccdc194A0A140LIT1 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc194A0A140LIT1 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc194A0A140LIT1 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Ccdc194A0A140LIT1 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Ccdc194A0A140LIT1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc194A0A140LIT1 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Ccdc194A0A140LIT1 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc194A0A140LIT1 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Ccdc194A0A140LIT1 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc194A0A140LIT1 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Ccdc194A0A140LIT1 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc194A0A140LIT1 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.9■□□□□ 0.62
Ccdc194A0A140LIT1 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc194A0A140LIT1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc194A0A140LIT1 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
Ccdc194A0A140LIT1 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.9■□□□□ 0.62
Ccdc194A0A140LIT1 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ccdc194A0A140LIT1 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ccdc194A0A140LIT1 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Ccdc194A0A140LIT1 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc194A0A140LIT1 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc194A0A140LIT1 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.89■□□□□ 0.61
Ccdc194A0A140LIT1 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc194A0A140LIT1 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Ccdc194A0A140LIT1 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc194A0A140LIT1 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc194A0A140LIT1 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Ccdc194A0A140LIT1 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc194A0A140LIT1 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.89■□□□□ 0.61
Ccdc194A0A140LIT1 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc194A0A140LIT1 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc194A0A140LIT1 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc194A0A140LIT1 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc194A0A140LIT1 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ccdc194A0A140LIT1 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.89■□□□□ 0.61
Ccdc194A0A140LIT1 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc194A0A140LIT1 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Ccdc194A0A140LIT1 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc194A0A140LIT1 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Ccdc194A0A140LIT1 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc194A0A140LIT1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Ccdc194A0A140LIT1 Gm13241-201ENSMUST00000094493 780 ntBASIC18.88■□□□□ 0.61
Ccdc194A0A140LIT1 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc194A0A140LIT1 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc194A0A140LIT1 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc194A0A140LIT1 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc194A0A140LIT1 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc194A0A140LIT1 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Ccdc194A0A140LIT1 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ccdc194A0A140LIT1 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc194A0A140LIT1 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Ccdc194A0A140LIT1 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc194A0A140LIT1 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc194A0A140LIT1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc194A0A140LIT1 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Ccdc194A0A140LIT1 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc194A0A140LIT1 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.87■□□□□ 0.61
Ccdc194A0A140LIT1 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc194A0A140LIT1 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc194A0A140LIT1 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc194A0A140LIT1 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc194A0A140LIT1 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc194A0A140LIT1 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Ccdc194A0A140LIT1 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc194A0A140LIT1 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc194A0A140LIT1 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ccdc194A0A140LIT1 Golph3-205ENSMUST00000228671 2842 ntBASIC18.87■□□□□ 0.61
Ccdc194A0A140LIT1 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.87■□□□□ 0.61
Ccdc194A0A140LIT1 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.86■□□□□ 0.61
Ccdc194A0A140LIT1 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms