Protein–RNA interactions for Protein: A0A140LHH9

Gm35339, Predicted gene, 35339, mousemouse

Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm35339A0A140LHH9 Gm6433-201ENSMUST00000118634 875 ntBASIC40.73■■■■■ 4.11
Gm35339A0A140LHH9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC40.73■■■■■ 4.11
Gm35339A0A140LHH9 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC40.73■■■■■ 4.11
Gm35339A0A140LHH9 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC40.73■■■■■ 4.11
Gm35339A0A140LHH9 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC40.72■■■■■ 4.11
Gm35339A0A140LHH9 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC40.72■■■■■ 4.11
Gm35339A0A140LHH9 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC40.72■■■■■ 4.11
Gm35339A0A140LHH9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC40.72■■■■■ 4.11
Gm35339A0A140LHH9 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC40.72■■■■■ 4.11
Gm35339A0A140LHH9 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC40.72■■■■■ 4.11
Gm35339A0A140LHH9 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC40.72■■■■■ 4.11
Gm35339A0A140LHH9 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC40.72■■■■■ 4.11
Gm35339A0A140LHH9 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC40.71■■■■■ 4.11
Gm35339A0A140LHH9 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC40.71■■■■■ 4.11
Gm35339A0A140LHH9 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC40.71■■■■■ 4.11
Gm35339A0A140LHH9 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC40.71■■■■■ 4.11
Gm35339A0A140LHH9 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC40.71■■■■■ 4.11
Gm35339A0A140LHH9 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC40.71■■■■■ 4.11
Gm35339A0A140LHH9 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC40.71■■■■■ 4.11
Gm35339A0A140LHH9 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC40.7■■■■■ 4.11
Gm35339A0A140LHH9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC40.7■■■■■ 4.11
Gm35339A0A140LHH9 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC40.7■■■■■ 4.11
Gm35339A0A140LHH9 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC40.69■■■■■ 4.1
Gm35339A0A140LHH9 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC40.69■■■■■ 4.1
Gm35339A0A140LHH9 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC40.69■■■■■ 4.1
Gm35339A0A140LHH9 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC40.69■■■■■ 4.1
Gm35339A0A140LHH9 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC40.68■■■■■ 4.1
Gm35339A0A140LHH9 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC40.68■■■■■ 4.1
Gm35339A0A140LHH9 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC40.68■■■■■ 4.1
Gm35339A0A140LHH9 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC40.68■■■■■ 4.1
Gm35339A0A140LHH9 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC40.67■■■■■ 4.1
Gm35339A0A140LHH9 Gm21814-202ENSMUST00000203277 873 ntBASIC40.67■■■■■ 4.1
Gm35339A0A140LHH9 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC40.67■■■■■ 4.1
Gm35339A0A140LHH9 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC40.67■■■■■ 4.1
Gm35339A0A140LHH9 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC40.67■■■■■ 4.1
Gm35339A0A140LHH9 Gm37035-201ENSMUST00000194809 2148 ntBASIC40.66■■■■■ 4.1
Gm35339A0A140LHH9 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC40.66■■■■■ 4.1
Gm35339A0A140LHH9 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC40.66■■■■■ 4.1
Gm35339A0A140LHH9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC40.65■■■■■ 4.1
Gm35339A0A140LHH9 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC40.65■■■■■ 4.1
Gm35339A0A140LHH9 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC40.65■■■■■ 4.1
Gm35339A0A140LHH9 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC40.65■■■■■ 4.1
Gm35339A0A140LHH9 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC40.65■■■■■ 4.1
Gm35339A0A140LHH9 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC40.65■■■■■ 4.1
Gm35339A0A140LHH9 Gm19094-201ENSMUST00000209791 1246 ntBASIC40.65■■■■■ 4.1
Gm35339A0A140LHH9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC40.65■■■■■ 4.1
Gm35339A0A140LHH9 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC40.64■■■■■ 4.1
Gm35339A0A140LHH9 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC40.64■■■■■ 4.1
Gm35339A0A140LHH9 Gm10819-201ENSMUST00000099988 561 ntBASIC40.64■■■■■ 4.1
Gm35339A0A140LHH9 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC40.64■■■■■ 4.1
Gm35339A0A140LHH9 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC40.64■■■■■ 4.1
Gm35339A0A140LHH9 Gm32699-201ENSMUST00000221728 1988 ntBASIC40.64■■■■■ 4.1
Gm35339A0A140LHH9 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC40.64■■■■■ 4.1
Gm35339A0A140LHH9 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC40.64■■■■■ 4.1
Gm35339A0A140LHH9 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC40.64■■■■■ 4.1
Gm35339A0A140LHH9 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC40.64■■■■■ 4.1
Gm35339A0A140LHH9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC40.63■■■■■ 4.1
Gm35339A0A140LHH9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC40.63■■■■■ 4.1
Gm35339A0A140LHH9 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC40.63■■■■■ 4.09
Gm35339A0A140LHH9 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC40.63■■■■■ 4.09
Gm35339A0A140LHH9 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC40.63■■■■■ 4.09
Gm35339A0A140LHH9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC40.62■■■■■ 4.09
Gm35339A0A140LHH9 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC40.62■■■■■ 4.09
Gm35339A0A140LHH9 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC40.62■■■■■ 4.09
Gm35339A0A140LHH9 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC40.62■■■■■ 4.09
Gm35339A0A140LHH9 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC40.61■■■■■ 4.09
Gm35339A0A140LHH9 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC40.61■■■■■ 4.09
Gm35339A0A140LHH9 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC40.61■■■■■ 4.09
Gm35339A0A140LHH9 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC40.61■■■■■ 4.09
Gm35339A0A140LHH9 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC40.61■■■■■ 4.09
Gm35339A0A140LHH9 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC40.61■■■■■ 4.09
Gm35339A0A140LHH9 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC40.6■■■■■ 4.09
Gm35339A0A140LHH9 Gm11927-201ENSMUST00000118472 759 ntBASIC40.6■■■■■ 4.09
Gm35339A0A140LHH9 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC40.6■■■■■ 4.09
Gm35339A0A140LHH9 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC40.6■■■■■ 4.09
Gm35339A0A140LHH9 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC40.6■■■■■ 4.09
Gm35339A0A140LHH9 Gm5417-201ENSMUST00000079706 384 ntBASIC40.6■■■■■ 4.09
Gm35339A0A140LHH9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC40.6■■■■■ 4.09
Gm35339A0A140LHH9 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC40.59■■■■■ 4.09
Gm35339A0A140LHH9 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC40.59■■■■■ 4.09
Gm35339A0A140LHH9 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC40.59■■■■■ 4.09
Gm35339A0A140LHH9 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC40.58■■■■■ 4.09
Gm35339A0A140LHH9 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC40.58■■■■■ 4.09
Gm35339A0A140LHH9 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC40.58■■■■■ 4.09
Gm35339A0A140LHH9 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC40.58■■■■■ 4.09
Gm35339A0A140LHH9 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC40.57■■■■■ 4.09
Gm35339A0A140LHH9 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC40.57■■■■■ 4.09
Gm35339A0A140LHH9 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC40.57■■■■■ 4.09
Gm35339A0A140LHH9 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC40.57■■■■■ 4.09
Gm35339A0A140LHH9 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC40.57■■■■■ 4.08
Gm35339A0A140LHH9 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC40.56■■■■■ 4.08
Gm35339A0A140LHH9 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC40.56■■■■■ 4.08
Gm35339A0A140LHH9 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC40.55■■■■■ 4.08
Gm35339A0A140LHH9 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC40.55■■■■■ 4.08
Gm35339A0A140LHH9 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC40.55■■■■■ 4.08
Gm35339A0A140LHH9 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC40.54■■■■■ 4.08
Gm35339A0A140LHH9 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC40.54■■■■■ 4.08
Gm35339A0A140LHH9 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC40.54■■■■■ 4.08
Gm35339A0A140LHH9 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC40.54■■■■■ 4.08
Gm35339A0A140LHH9 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC40.53■■■■■ 4.08
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms