Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC16.68■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm38342-201ENSMUST00000195710 2980 ntBASIC16.67■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm12251-201ENSMUST00000117893 792 ntBASIC16.67■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.67■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.67■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.66■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC16.66■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Flvcr1-202ENSMUST00000191946 1216 ntBASIC16.66■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.65■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC16.65■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.65■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav15d-2-dv6d-2A0A0G2JGQ7 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC16.64■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC16.64■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.64■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC16.63■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC16.62■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav15d-2-dv6d-2A0A0G2JGQ7 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms