Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav23A0A0G2JG17 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav23A0A0G2JG17 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC15.56■□□□□ 0.08
Trav23A0A0G2JG17 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Trav23A0A0G2JG17 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav23A0A0G2JG17 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav23A0A0G2JG17 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav23A0A0G2JG17 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav23A0A0G2JG17 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav23A0A0G2JG17 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.56■□□□□ 0.08
Trav23A0A0G2JG17 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav23A0A0G2JG17 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav23A0A0G2JG17 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav23A0A0G2JG17 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav23A0A0G2JG17 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav23A0A0G2JG17 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav23A0A0G2JG17 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav23A0A0G2JG17 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav23A0A0G2JG17 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav23A0A0G2JG17 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav23A0A0G2JG17 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav23A0A0G2JG17 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav23A0A0G2JG17 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav23A0A0G2JG17 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav23A0A0G2JG17 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trav23A0A0G2JG17 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav23A0A0G2JG17 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Trav23A0A0G2JG17 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav23A0A0G2JG17 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav23A0A0G2JG17 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav23A0A0G2JG17 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav23A0A0G2JG17 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav23A0A0G2JG17 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav23A0A0G2JG17 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav23A0A0G2JG17 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav23A0A0G2JG17 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav23A0A0G2JG17 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Trav23A0A0G2JG17 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trav23A0A0G2JG17 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trav23A0A0G2JG17 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.54■□□□□ 0.08
Trav23A0A0G2JG17 AA386476-201ENSMUST00000098781 1665 ntBASIC15.54■□□□□ 0.08
Trav23A0A0G2JG17 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.54■□□□□ 0.08
Trav23A0A0G2JG17 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav23A0A0G2JG17 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav23A0A0G2JG17 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav23A0A0G2JG17 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Trav23A0A0G2JG17 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Trav23A0A0G2JG17 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Trav23A0A0G2JG17 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC15.53■□□□□ 0.08
Trav23A0A0G2JG17 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav23A0A0G2JG17 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav23A0A0G2JG17 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav23A0A0G2JG17 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav23A0A0G2JG17 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15.53■□□□□ 0.08
Trav23A0A0G2JG17 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav23A0A0G2JG17 Gm6802-201ENSMUST00000167843 1983 ntBASIC15.53■□□□□ 0.08
Trav23A0A0G2JG17 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav23A0A0G2JG17 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav23A0A0G2JG17 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav23A0A0G2JG17 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
Trav23A0A0G2JG17 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
Trav23A0A0G2JG17 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav23A0A0G2JG17 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav23A0A0G2JG17 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav23A0A0G2JG17 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav23A0A0G2JG17 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trav23A0A0G2JG17 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav23A0A0G2JG17 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav23A0A0G2JG17 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav23A0A0G2JG17 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav23A0A0G2JG17 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav23A0A0G2JG17 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav23A0A0G2JG17 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav23A0A0G2JG17 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav23A0A0G2JG17 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav23A0A0G2JG17 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav23A0A0G2JG17 Gm42911-201ENSMUST00000199360 1630 ntBASIC15.51■□□□□ 0.07
Trav23A0A0G2JG17 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav23A0A0G2JG17 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trav23A0A0G2JG17 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.51■□□□□ 0.07
Trav23A0A0G2JG17 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC15.51■□□□□ 0.07
Trav23A0A0G2JG17 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav23A0A0G2JG17 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav23A0A0G2JG17 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trav23A0A0G2JG17 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav23A0A0G2JG17 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav23A0A0G2JG17 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav23A0A0G2JG17 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Trav23A0A0G2JG17 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav23A0A0G2JG17 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav23A0A0G2JG17 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav23A0A0G2JG17 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
Trav23A0A0G2JG17 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav23A0A0G2JG17 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trav23A0A0G2JG17 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav23A0A0G2JG17 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.5■□□□□ 0.07
Trav23A0A0G2JG17 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav23A0A0G2JG17 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav23A0A0G2JG17 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Trav23A0A0G2JG17 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms