Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav4-3A0A0B4J1K1 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav4-3A0A0B4J1K1 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Trav4-3A0A0B4J1K1 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav4-3A0A0B4J1K1 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC13.02□□□□□ -0.32
Trav4-3A0A0B4J1K1 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav4-3A0A0B4J1K1 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC13.02□□□□□ -0.33
Trav4-3A0A0B4J1K1 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav4-3A0A0B4J1K1 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trav4-3A0A0B4J1K1 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav4-3A0A0B4J1K1 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trav4-3A0A0B4J1K1 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trav4-3A0A0B4J1K1 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC13.02□□□□□ -0.33
Trav4-3A0A0B4J1K1 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav4-3A0A0B4J1K1 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav4-3A0A0B4J1K1 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav4-3A0A0B4J1K1 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav4-3A0A0B4J1K1 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav4-3A0A0B4J1K1 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav4-3A0A0B4J1K1 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav4-3A0A0B4J1K1 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav4-3A0A0B4J1K1 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav4-3A0A0B4J1K1 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav4-3A0A0B4J1K1 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav4-3A0A0B4J1K1 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav4-3A0A0B4J1K1 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav4-3A0A0B4J1K1 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav4-3A0A0B4J1K1 Gm15853-202ENSMUST00000195518 2041 ntBASIC13.01□□□□□ -0.33
Trav4-3A0A0B4J1K1 Gm42939-201ENSMUST00000197514 2205 ntBASIC13.01□□□□□ -0.33
Trav4-3A0A0B4J1K1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav4-3A0A0B4J1K1 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav4-3A0A0B4J1K1 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav4-3A0A0B4J1K1 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Trav4-3A0A0B4J1K1 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav4-3A0A0B4J1K1 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav4-3A0A0B4J1K1 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav4-3A0A0B4J1K1 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav4-3A0A0B4J1K1 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav4-3A0A0B4J1K1 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav4-3A0A0B4J1K1 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav4-3A0A0B4J1K1 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trav4-3A0A0B4J1K1 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav4-3A0A0B4J1K1 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Trav4-3A0A0B4J1K1 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav4-3A0A0B4J1K1 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav4-3A0A0B4J1K1 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav4-3A0A0B4J1K1 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trav4-3A0A0B4J1K1 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav4-3A0A0B4J1K1 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav4-3A0A0B4J1K1 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4-3A0A0B4J1K1 AA386476-201ENSMUST00000098781 1665 ntBASIC12.99□□□□□ -0.33
Trav4-3A0A0B4J1K1 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4-3A0A0B4J1K1 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4-3A0A0B4J1K1 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav4-3A0A0B4J1K1 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4-3A0A0B4J1K1 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav4-3A0A0B4J1K1 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4-3A0A0B4J1K1 Gm20100-201ENSMUST00000209418 2272 ntBASIC12.99□□□□□ -0.33
Trav4-3A0A0B4J1K1 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4-3A0A0B4J1K1 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4-3A0A0B4J1K1 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4-3A0A0B4J1K1 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4-3A0A0B4J1K1 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4-3A0A0B4J1K1 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav4-3A0A0B4J1K1 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4-3A0A0B4J1K1 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4-3A0A0B4J1K1 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4-3A0A0B4J1K1 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav4-3A0A0B4J1K1 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4-3A0A0B4J1K1 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4-3A0A0B4J1K1 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav4-3A0A0B4J1K1 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4-3A0A0B4J1K1 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4-3A0A0B4J1K1 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4-3A0A0B4J1K1 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4-3A0A0B4J1K1 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4-3A0A0B4J1K1 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4-3A0A0B4J1K1 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC12.98□□□□□ -0.33
Trav4-3A0A0B4J1K1 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4-3A0A0B4J1K1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC12.98□□□□□ -0.33
Trav4-3A0A0B4J1K1 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC12.98□□□□□ -0.33
Trav4-3A0A0B4J1K1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC12.98□□□□□ -0.33
Trav4-3A0A0B4J1K1 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4-3A0A0B4J1K1 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4-3A0A0B4J1K1 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4-3A0A0B4J1K1 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4-3A0A0B4J1K1 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4-3A0A0B4J1K1 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Trav4-3A0A0B4J1K1 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav4-3A0A0B4J1K1 Gm7856-201ENSMUST00000117514 1493 ntBASIC12.97□□□□□ -0.33
Trav4-3A0A0B4J1K1 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-3A0A0B4J1K1 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-3A0A0B4J1K1 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-3A0A0B4J1K1 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-3A0A0B4J1K1 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-3A0A0B4J1K1 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-3A0A0B4J1K1 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-3A0A0B4J1K1 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4-3A0A0B4J1K1 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav4-3A0A0B4J1K1 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms