Protein–RNA interactions for Protein: A0A0A6YY83

Pcdh7, Protocadherin 7, mousemouse

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh7A0A0A6YY83 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh7A0A0A6YY83 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Pcdh7A0A0A6YY83 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh7A0A0A6YY83 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh7A0A0A6YY83 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pcdh7A0A0A6YY83 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdh7A0A0A6YY83 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdh7A0A0A6YY83 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pcdh7A0A0A6YY83 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdh7A0A0A6YY83 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.64■□□□□ 0.73
Pcdh7A0A0A6YY83 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdh7A0A0A6YY83 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.64■□□□□ 0.73
Pcdh7A0A0A6YY83 Gm38205-201ENSMUST00000192243 258 ntBASIC19.64■□□□□ 0.73
Pcdh7A0A0A6YY83 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Pcdh7A0A0A6YY83 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.64■□□□□ 0.73
Pcdh7A0A0A6YY83 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdh7A0A0A6YY83 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Pcdh7A0A0A6YY83 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.64■□□□□ 0.73
Pcdh7A0A0A6YY83 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdh7A0A0A6YY83 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Pcdh7A0A0A6YY83 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdh7A0A0A6YY83 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pcdh7A0A0A6YY83 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh7A0A0A6YY83 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh7A0A0A6YY83 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh7A0A0A6YY83 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh7A0A0A6YY83 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh7A0A0A6YY83 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh7A0A0A6YY83 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh7A0A0A6YY83 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh7A0A0A6YY83 Gm9988-201ENSMUST00000069786 435 ntBASIC19.63■□□□□ 0.73
Pcdh7A0A0A6YY83 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh7A0A0A6YY83 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh7A0A0A6YY83 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh7A0A0A6YY83 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh7A0A0A6YY83 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdh7A0A0A6YY83 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Pcdh7A0A0A6YY83 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh7A0A0A6YY83 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh7A0A0A6YY83 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Pcdh7A0A0A6YY83 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh7A0A0A6YY83 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.62■□□□□ 0.73
Pcdh7A0A0A6YY83 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Pcdh7A0A0A6YY83 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdh7A0A0A6YY83 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh7A0A0A6YY83 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh7A0A0A6YY83 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh7A0A0A6YY83 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh7A0A0A6YY83 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh7A0A0A6YY83 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh7A0A0A6YY83 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh7A0A0A6YY83 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh7A0A0A6YY83 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.61■□□□□ 0.73
Pcdh7A0A0A6YY83 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.61■□□□□ 0.73
Pcdh7A0A0A6YY83 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh7A0A0A6YY83 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Pcdh7A0A0A6YY83 Gm10493-201ENSMUST00000097270 612 ntBASIC19.61■□□□□ 0.73
Pcdh7A0A0A6YY83 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh7A0A0A6YY83 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh7A0A0A6YY83 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh7A0A0A6YY83 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdh7A0A0A6YY83 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh7A0A0A6YY83 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh7A0A0A6YY83 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh7A0A0A6YY83 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Pcdh7A0A0A6YY83 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC19.6■□□□□ 0.73
Pcdh7A0A0A6YY83 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC19.6■□□□□ 0.73
Pcdh7A0A0A6YY83 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh7A0A0A6YY83 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh7A0A0A6YY83 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh7A0A0A6YY83 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh7A0A0A6YY83 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.6■□□□□ 0.73
Pcdh7A0A0A6YY83 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.6■□□□□ 0.73
Pcdh7A0A0A6YY83 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Pcdh7A0A0A6YY83 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh7A0A0A6YY83 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdh7A0A0A6YY83 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh7A0A0A6YY83 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.59■□□□□ 0.73
Pcdh7A0A0A6YY83 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh7A0A0A6YY83 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC19.59■□□□□ 0.73
Pcdh7A0A0A6YY83 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh7A0A0A6YY83 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh7A0A0A6YY83 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh7A0A0A6YY83 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh7A0A0A6YY83 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh7A0A0A6YY83 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdh7A0A0A6YY83 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.58■□□□□ 0.73
Pcdh7A0A0A6YY83 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdh7A0A0A6YY83 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdh7A0A0A6YY83 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdh7A0A0A6YY83 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdh7A0A0A6YY83 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
Pcdh7A0A0A6YY83 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdh7A0A0A6YY83 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdh7A0A0A6YY83 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Pcdh7A0A0A6YY83 CT010467.1-202ENSMUST00000205406 714 ntBASIC19.58■□□□□ 0.72
Pcdh7A0A0A6YY83 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdh7A0A0A6YY83 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdh7A0A0A6YY83 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdh7A0A0A6YY83 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms