Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6n-6A0A075B6B2 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6n-6A0A075B6B2 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav6n-6A0A075B6B2 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6n-6A0A075B6B2 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6n-6A0A075B6B2 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6n-6A0A075B6B2 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC14.15□□□□□ -0.14
Trav6n-6A0A075B6B2 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trav6n-6A0A075B6B2 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6n-6A0A075B6B2 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6n-6A0A075B6B2 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6n-6A0A075B6B2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav6n-6A0A075B6B2 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC14.14□□□□□ -0.15
Trav6n-6A0A075B6B2 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trav6n-6A0A075B6B2 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trav6n-6A0A075B6B2 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6n-6A0A075B6B2 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6n-6A0A075B6B2 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6n-6A0A075B6B2 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6n-6A0A075B6B2 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6n-6A0A075B6B2 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6n-6A0A075B6B2 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6n-6A0A075B6B2 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC14.14□□□□□ -0.15
Trav6n-6A0A075B6B2 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6n-6A0A075B6B2 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC14.14□□□□□ -0.15
Trav6n-6A0A075B6B2 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Trav6n-6A0A075B6B2 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6n-6A0A075B6B2 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6n-6A0A075B6B2 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6n-6A0A075B6B2 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6n-6A0A075B6B2 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6n-6A0A075B6B2 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trav6n-6A0A075B6B2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
Trav6n-6A0A075B6B2 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trav6n-6A0A075B6B2 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6n-6A0A075B6B2 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6n-6A0A075B6B2 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6n-6A0A075B6B2 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Trav6n-6A0A075B6B2 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6n-6A0A075B6B2 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Trav6n-6A0A075B6B2 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6n-6A0A075B6B2 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6n-6A0A075B6B2 Gm9847-201ENSMUST00000052528 599 ntBASIC14.13□□□□□ -0.15
Trav6n-6A0A075B6B2 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6n-6A0A075B6B2 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Trav6n-6A0A075B6B2 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6n-6A0A075B6B2 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6n-6A0A075B6B2 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6n-6A0A075B6B2 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC14.13□□□□□ -0.15
Trav6n-6A0A075B6B2 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6n-6A0A075B6B2 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6n-6A0A075B6B2 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6n-6A0A075B6B2 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6n-6A0A075B6B2 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6n-6A0A075B6B2 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6n-6A0A075B6B2 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC14.12□□□□□ -0.15
Trav6n-6A0A075B6B2 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6n-6A0A075B6B2 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6n-6A0A075B6B2 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trav6n-6A0A075B6B2 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6n-6A0A075B6B2 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6n-6A0A075B6B2 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6n-6A0A075B6B2 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6n-6A0A075B6B2 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav6n-6A0A075B6B2 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav6n-6A0A075B6B2 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6n-6A0A075B6B2 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6n-6A0A075B6B2 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6n-6A0A075B6B2 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trav6n-6A0A075B6B2 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6n-6A0A075B6B2 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6n-6A0A075B6B2 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav6n-6A0A075B6B2 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6n-6A0A075B6B2 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6n-6A0A075B6B2 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trav6n-6A0A075B6B2 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6n-6A0A075B6B2 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6n-6A0A075B6B2 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6n-6A0A075B6B2 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Trav6n-6A0A075B6B2 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6n-6A0A075B6B2 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trav6n-6A0A075B6B2 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6n-6A0A075B6B2 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav6n-6A0A075B6B2 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6n-6A0A075B6B2 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav6n-6A0A075B6B2 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6n-6A0A075B6B2 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC14.1□□□□□ -0.15
Trav6n-6A0A075B6B2 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC14.1□□□□□ -0.15
Trav6n-6A0A075B6B2 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Trav6n-6A0A075B6B2 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6n-6A0A075B6B2 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6n-6A0A075B6B2 Gm13241-201ENSMUST00000094493 780 ntBASIC14.1□□□□□ -0.15
Trav6n-6A0A075B6B2 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trav6n-6A0A075B6B2 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6n-6A0A075B6B2 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6n-6A0A075B6B2 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
Trav6n-6A0A075B6B2 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Trav6n-6A0A075B6B2 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav6n-6A0A075B6B2 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC14.1□□□□□ -0.15
Trav6n-6A0A075B6B2 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms