Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6d-7A0A075B6B0 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav6d-7A0A075B6B0 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6d-7A0A075B6B0 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6d-7A0A075B6B0 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6d-7A0A075B6B0 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6d-7A0A075B6B0 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav6d-7A0A075B6B0 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav6d-7A0A075B6B0 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC14.66□□□□□ -0.06
Trav6d-7A0A075B6B0 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-7A0A075B6B0 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-7A0A075B6B0 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav6d-7A0A075B6B0 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-7A0A075B6B0 Gm38342-201ENSMUST00000195710 2980 ntBASIC14.65□□□□□ -0.06
Trav6d-7A0A075B6B0 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-7A0A075B6B0 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Trav6d-7A0A075B6B0 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-7A0A075B6B0 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-7A0A075B6B0 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-7A0A075B6B0 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-7A0A075B6B0 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC14.65□□□□□ -0.06
Trav6d-7A0A075B6B0 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-7A0A075B6B0 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC14.65□□□□□ -0.06
Trav6d-7A0A075B6B0 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav6d-7A0A075B6B0 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-7A0A075B6B0 Gm43017-201ENSMUST00000198296 752 ntBASIC14.65□□□□□ -0.06
Trav6d-7A0A075B6B0 Wdr70-203ENSMUST00000227371 1130 ntBASIC14.65□□□□□ -0.06
Trav6d-7A0A075B6B0 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-7A0A075B6B0 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-7A0A075B6B0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav6d-7A0A075B6B0 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-7A0A075B6B0 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav6d-7A0A075B6B0 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6d-7A0A075B6B0 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6d-7A0A075B6B0 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6d-7A0A075B6B0 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav6d-7A0A075B6B0 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trav6d-7A0A075B6B0 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Trav6d-7A0A075B6B0 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6d-7A0A075B6B0 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6d-7A0A075B6B0 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC14.64□□□□□ -0.07
Trav6d-7A0A075B6B0 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Trav6d-7A0A075B6B0 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6d-7A0A075B6B0 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trav6d-7A0A075B6B0 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trav6d-7A0A075B6B0 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6d-7A0A075B6B0 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6d-7A0A075B6B0 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
Trav6d-7A0A075B6B0 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6d-7A0A075B6B0 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6d-7A0A075B6B0 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav6d-7A0A075B6B0 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav6d-7A0A075B6B0 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6d-7A0A075B6B0 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6d-7A0A075B6B0 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6d-7A0A075B6B0 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav6d-7A0A075B6B0 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6d-7A0A075B6B0 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6d-7A0A075B6B0 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6d-7A0A075B6B0 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC14.63□□□□□ -0.07
Trav6d-7A0A075B6B0 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC14.63□□□□□ -0.07
Trav6d-7A0A075B6B0 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6d-7A0A075B6B0 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trav6d-7A0A075B6B0 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Trav6d-7A0A075B6B0 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
Trav6d-7A0A075B6B0 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6d-7A0A075B6B0 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6d-7A0A075B6B0 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav6d-7A0A075B6B0 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav6d-7A0A075B6B0 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Trav6d-7A0A075B6B0 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6d-7A0A075B6B0 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6d-7A0A075B6B0 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6d-7A0A075B6B0 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Trav6d-7A0A075B6B0 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6d-7A0A075B6B0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6d-7A0A075B6B0 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6d-7A0A075B6B0 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6d-7A0A075B6B0 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav6d-7A0A075B6B0 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6d-7A0A075B6B0 Gm21168-201ENSMUST00000199646 1096 ntBASIC14.62□□□□□ -0.07
Trav6d-7A0A075B6B0 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Trav6d-7A0A075B6B0 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6d-7A0A075B6B0 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6d-7A0A075B6B0 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6d-7A0A075B6B0 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Trav6d-7A0A075B6B0 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
Trav6d-7A0A075B6B0 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav6d-7A0A075B6B0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
Trav6d-7A0A075B6B0 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6d-7A0A075B6B0 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6d-7A0A075B6B0 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trav6d-7A0A075B6B0 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6d-7A0A075B6B0 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6d-7A0A075B6B0 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav6d-7A0A075B6B0 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6d-7A0A075B6B0 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6d-7A0A075B6B0 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav6d-7A0A075B6B0 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.61□□□□□ -0.07
Trav6d-7A0A075B6B0 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms