Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12d-3A0A075B6A4 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12d-3A0A075B6A4 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12d-3A0A075B6A4 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12d-3A0A075B6A4 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Trav12d-3A0A075B6A4 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12d-3A0A075B6A4 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12d-3A0A075B6A4 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12d-3A0A075B6A4 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12d-3A0A075B6A4 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12d-3A0A075B6A4 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12d-3A0A075B6A4 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12d-3A0A075B6A4 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12d-3A0A075B6A4 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12d-3A0A075B6A4 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12d-3A0A075B6A4 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC14.24□□□□□ -0.13
Trav12d-3A0A075B6A4 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12d-3A0A075B6A4 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12d-3A0A075B6A4 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12d-3A0A075B6A4 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12d-3A0A075B6A4 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12d-3A0A075B6A4 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12d-3A0A075B6A4 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav12d-3A0A075B6A4 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12d-3A0A075B6A4 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Trav12d-3A0A075B6A4 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12d-3A0A075B6A4 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12d-3A0A075B6A4 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12d-3A0A075B6A4 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12d-3A0A075B6A4 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12d-3A0A075B6A4 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12d-3A0A075B6A4 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav12d-3A0A075B6A4 Gm8503-201ENSMUST00000118131 455 ntBASIC14.23□□□□□ -0.13
Trav12d-3A0A075B6A4 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC14.23□□□□□ -0.13
Trav12d-3A0A075B6A4 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12d-3A0A075B6A4 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Trav12d-3A0A075B6A4 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trav12d-3A0A075B6A4 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav12d-3A0A075B6A4 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12d-3A0A075B6A4 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12d-3A0A075B6A4 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav12d-3A0A075B6A4 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav12d-3A0A075B6A4 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12d-3A0A075B6A4 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12d-3A0A075B6A4 Gm28536-201ENSMUST00000190971 1317 ntBASIC14.22□□□□□ -0.13
Trav12d-3A0A075B6A4 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12d-3A0A075B6A4 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12d-3A0A075B6A4 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Trav12d-3A0A075B6A4 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12d-3A0A075B6A4 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trav12d-3A0A075B6A4 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12d-3A0A075B6A4 Gm7432-201ENSMUST00000210343 879 ntBASIC14.22□□□□□ -0.13
Trav12d-3A0A075B6A4 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12d-3A0A075B6A4 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12d-3A0A075B6A4 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12d-3A0A075B6A4 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12d-3A0A075B6A4 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12d-3A0A075B6A4 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12d-3A0A075B6A4 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12d-3A0A075B6A4 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav12d-3A0A075B6A4 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12d-3A0A075B6A4 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12d-3A0A075B6A4 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trav12d-3A0A075B6A4 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trav12d-3A0A075B6A4 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.21□□□□□ -0.13
Trav12d-3A0A075B6A4 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12d-3A0A075B6A4 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12d-3A0A075B6A4 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12d-3A0A075B6A4 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12d-3A0A075B6A4 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12d-3A0A075B6A4 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12d-3A0A075B6A4 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav12d-3A0A075B6A4 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav12d-3A0A075B6A4 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav12d-3A0A075B6A4 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav12d-3A0A075B6A4 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav12d-3A0A075B6A4 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12d-3A0A075B6A4 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12d-3A0A075B6A4 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav12d-3A0A075B6A4 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12d-3A0A075B6A4 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12d-3A0A075B6A4 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC14.2□□□□□ -0.14
Trav12d-3A0A075B6A4 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12d-3A0A075B6A4 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.2□□□□□ -0.14
Trav12d-3A0A075B6A4 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trav12d-3A0A075B6A4 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12d-3A0A075B6A4 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC14.2□□□□□ -0.14
Trav12d-3A0A075B6A4 Mir6236-201ENSMUST00000184437 123 ntBASIC14.2□□□□□ -0.14
Trav12d-3A0A075B6A4 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trav12d-3A0A075B6A4 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC14.2□□□□□ -0.14
Trav12d-3A0A075B6A4 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12d-3A0A075B6A4 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12d-3A0A075B6A4 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12d-3A0A075B6A4 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12d-3A0A075B6A4 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12d-3A0A075B6A4 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav12d-3A0A075B6A4 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trav12d-3A0A075B6A4 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.2□□□□□ -0.14
Trav12d-3A0A075B6A4 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trav12d-3A0A075B6A4 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 112.5 ms