Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav4-4-dv10A0A075B651 Gm22238-201ENSMUST00000175222 88 ntBASIC14.85□□□□□ -0.03
Trav4-4-dv10A0A075B651 Serp2-204ENSMUST00000228055 705 ntBASIC14.85□□□□□ -0.03
Trav4-4-dv10A0A075B651 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav4-4-dv10A0A075B651 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trav4-4-dv10A0A075B651 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trav4-4-dv10A0A075B651 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav4-4-dv10A0A075B651 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Trav4-4-dv10A0A075B651 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav4-4-dv10A0A075B651 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav4-4-dv10A0A075B651 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav4-4-dv10A0A075B651 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trav4-4-dv10A0A075B651 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav4-4-dv10A0A075B651 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav4-4-dv10A0A075B651 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav4-4-dv10A0A075B651 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav4-4-dv10A0A075B651 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav4-4-dv10A0A075B651 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC14.84□□□□□ -0.03
Trav4-4-dv10A0A075B651 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
Trav4-4-dv10A0A075B651 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav4-4-dv10A0A075B651 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC14.84□□□□□ -0.03
Trav4-4-dv10A0A075B651 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav4-4-dv10A0A075B651 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav4-4-dv10A0A075B651 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trav4-4-dv10A0A075B651 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trav4-4-dv10A0A075B651 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav4-4-dv10A0A075B651 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav4-4-dv10A0A075B651 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav4-4-dv10A0A075B651 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav4-4-dv10A0A075B651 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC14.83□□□□□ -0.04
Trav4-4-dv10A0A075B651 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC14.83□□□□□ -0.04
Trav4-4-dv10A0A075B651 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav4-4-dv10A0A075B651 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav4-4-dv10A0A075B651 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav4-4-dv10A0A075B651 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav4-4-dv10A0A075B651 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav4-4-dv10A0A075B651 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC14.83□□□□□ -0.04
Trav4-4-dv10A0A075B651 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav4-4-dv10A0A075B651 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav4-4-dv10A0A075B651 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav4-4-dv10A0A075B651 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav4-4-dv10A0A075B651 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav4-4-dv10A0A075B651 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav4-4-dv10A0A075B651 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav4-4-dv10A0A075B651 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC14.82□□□□□ -0.04
Trav4-4-dv10A0A075B651 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC14.82□□□□□ -0.04
Trav4-4-dv10A0A075B651 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trav4-4-dv10A0A075B651 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC14.82□□□□□ -0.04
Trav4-4-dv10A0A075B651 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC14.82□□□□□ -0.04
Trav4-4-dv10A0A075B651 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC14.82□□□□□ -0.04
Trav4-4-dv10A0A075B651 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav4-4-dv10A0A075B651 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav4-4-dv10A0A075B651 Gm5540-201ENSMUST00000131852 1848 ntBASIC14.82□□□□□ -0.04
Trav4-4-dv10A0A075B651 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav4-4-dv10A0A075B651 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav4-4-dv10A0A075B651 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav4-4-dv10A0A075B651 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav4-4-dv10A0A075B651 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav4-4-dv10A0A075B651 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav4-4-dv10A0A075B651 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav4-4-dv10A0A075B651 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC14.81□□□□□ -0.04
Trav4-4-dv10A0A075B651 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav4-4-dv10A0A075B651 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
Trav4-4-dv10A0A075B651 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav4-4-dv10A0A075B651 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav4-4-dv10A0A075B651 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav4-4-dv10A0A075B651 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Trav4-4-dv10A0A075B651 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav4-4-dv10A0A075B651 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav4-4-dv10A0A075B651 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav4-4-dv10A0A075B651 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14.8□□□□□ -0.04
Trav4-4-dv10A0A075B651 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav4-4-dv10A0A075B651 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav4-4-dv10A0A075B651 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trav4-4-dv10A0A075B651 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav4-4-dv10A0A075B651 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav4-4-dv10A0A075B651 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav4-4-dv10A0A075B651 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
Trav4-4-dv10A0A075B651 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav4-4-dv10A0A075B651 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav4-4-dv10A0A075B651 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav4-4-dv10A0A075B651 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.79□□□□□ -0.04
Trav4-4-dv10A0A075B651 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav4-4-dv10A0A075B651 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trav4-4-dv10A0A075B651 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Trav4-4-dv10A0A075B651 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav4-4-dv10A0A075B651 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav4-4-dv10A0A075B651 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav4-4-dv10A0A075B651 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav4-4-dv10A0A075B651 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav4-4-dv10A0A075B651 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav4-4-dv10A0A075B651 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav4-4-dv10A0A075B651 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav4-4-dv10A0A075B651 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav4-4-dv10A0A075B651 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav4-4-dv10A0A075B651 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav4-4-dv10A0A075B651 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav4-4-dv10A0A075B651 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav4-4-dv10A0A075B651 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav4-4-dv10A0A075B651 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms