Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav4d-3A0A075B625 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav4d-3A0A075B625 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav4d-3A0A075B625 Gm42939-201ENSMUST00000197514 2205 ntBASIC13□□□□□ -0.33
Trav4d-3A0A075B625 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav4d-3A0A075B625 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4d-3A0A075B625 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4d-3A0A075B625 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4d-3A0A075B625 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4d-3A0A075B625 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4d-3A0A075B625 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4d-3A0A075B625 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4d-3A0A075B625 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav4d-3A0A075B625 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4d-3A0A075B625 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4d-3A0A075B625 Mir6236-201ENSMUST00000184437 123 ntBASIC12.99□□□□□ -0.33
Trav4d-3A0A075B625 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav4d-3A0A075B625 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4d-3A0A075B625 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4d-3A0A075B625 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC12.99□□□□□ -0.33
Trav4d-3A0A075B625 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4d-3A0A075B625 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav4d-3A0A075B625 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4d-3A0A075B625 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4d-3A0A075B625 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4d-3A0A075B625 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC12.99□□□□□ -0.33
Trav4d-3A0A075B625 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC12.99□□□□□ -0.33
Trav4d-3A0A075B625 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4d-3A0A075B625 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav4d-3A0A075B625 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4d-3A0A075B625 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav4d-3A0A075B625 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Trav4d-3A0A075B625 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4d-3A0A075B625 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4d-3A0A075B625 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4d-3A0A075B625 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4d-3A0A075B625 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4d-3A0A075B625 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4d-3A0A075B625 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4d-3A0A075B625 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Trav4d-3A0A075B625 Gm45640-201ENSMUST00000210665 1896 ntBASIC12.98□□□□□ -0.33
Trav4d-3A0A075B625 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4d-3A0A075B625 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4d-3A0A075B625 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Trav4d-3A0A075B625 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC12.98□□□□□ -0.33
Trav4d-3A0A075B625 AC151971.4-201ENSMUST00000214717 704 ntBASIC12.98□□□□□ -0.33
Trav4d-3A0A075B625 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4d-3A0A075B625 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4d-3A0A075B625 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC12.98□□□□□ -0.33
Trav4d-3A0A075B625 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC12.98□□□□□ -0.33
Trav4d-3A0A075B625 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4d-3A0A075B625 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Trav4d-3A0A075B625 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Trav4d-3A0A075B625 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4d-3A0A075B625 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4d-3A0A075B625 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4d-3A0A075B625 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav4d-3A0A075B625 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav4d-3A0A075B625 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4d-3A0A075B625 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Trav4d-3A0A075B625 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4d-3A0A075B625 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4d-3A0A075B625 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4d-3A0A075B625 Gm28536-201ENSMUST00000190971 1317 ntBASIC12.97□□□□□ -0.33
Trav4d-3A0A075B625 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Trav4d-3A0A075B625 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav4d-3A0A075B625 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4d-3A0A075B625 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4d-3A0A075B625 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4d-3A0A075B625 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav4d-3A0A075B625 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC12.97□□□□□ -0.33
Trav4d-3A0A075B625 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4d-3A0A075B625 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4d-3A0A075B625 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4d-3A0A075B625 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4d-3A0A075B625 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4d-3A0A075B625 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Trav4d-3A0A075B625 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4d-3A0A075B625 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav4d-3A0A075B625 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4d-3A0A075B625 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4d-3A0A075B625 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Trav4d-3A0A075B625 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4d-3A0A075B625 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4d-3A0A075B625 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC12.96□□□□□ -0.33
Trav4d-3A0A075B625 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4d-3A0A075B625 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4d-3A0A075B625 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4d-3A0A075B625 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4d-3A0A075B625 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4d-3A0A075B625 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4d-3A0A075B625 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Trav4d-3A0A075B625 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Trav4d-3A0A075B625 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Trav4d-3A0A075B625 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Trav4d-3A0A075B625 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav4d-3A0A075B625 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav4d-3A0A075B625 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Trav4d-3A0A075B625 AC154231.1-201ENSMUST00000220564 2175 ntBASIC12.96□□□□□ -0.34
Trav4d-3A0A075B625 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms