Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4n-4A0A075B615 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Trav4n-4A0A075B615 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4n-4A0A075B615 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4n-4A0A075B615 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4n-4A0A075B615 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Trav4n-4A0A075B615 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4n-4A0A075B615 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC13.26□□□□□ -0.29
Trav4n-4A0A075B615 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4n-4A0A075B615 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC13.26□□□□□ -0.29
Trav4n-4A0A075B615 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC13.26□□□□□ -0.29
Trav4n-4A0A075B615 Gm45640-201ENSMUST00000210665 1896 ntBASIC13.26□□□□□ -0.29
Trav4n-4A0A075B615 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC13.26□□□□□ -0.29
Trav4n-4A0A075B615 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4n-4A0A075B615 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4n-4A0A075B615 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav4n-4A0A075B615 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trav4n-4A0A075B615 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Trav4n-4A0A075B615 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4n-4A0A075B615 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4n-4A0A075B615 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav4n-4A0A075B615 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4n-4A0A075B615 Gm43548-201ENSMUST00000197139 2353 ntBASIC13.25□□□□□ -0.29
Trav4n-4A0A075B615 AC123834.2-201ENSMUST00000224038 2340 ntBASIC13.25□□□□□ -0.29
Trav4n-4A0A075B615 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Trav4n-4A0A075B615 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4n-4A0A075B615 Gm15853-202ENSMUST00000195518 2041 ntBASIC13.25□□□□□ -0.29
Trav4n-4A0A075B615 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4n-4A0A075B615 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4n-4A0A075B615 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4n-4A0A075B615 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav4n-4A0A075B615 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4n-4A0A075B615 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4n-4A0A075B615 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4n-4A0A075B615 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4n-4A0A075B615 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4n-4A0A075B615 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4n-4A0A075B615 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav4n-4A0A075B615 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4n-4A0A075B615 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4n-4A0A075B615 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4n-4A0A075B615 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4n-4A0A075B615 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4n-4A0A075B615 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4n-4A0A075B615 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav4n-4A0A075B615 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4n-4A0A075B615 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4n-4A0A075B615 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4n-4A0A075B615 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4n-4A0A075B615 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC13.24□□□□□ -0.29
Trav4n-4A0A075B615 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC13.24□□□□□ -0.29
Trav4n-4A0A075B615 AC167019.3-201ENSMUST00000228225 1266 ntBASIC13.24□□□□□ -0.29
Trav4n-4A0A075B615 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4n-4A0A075B615 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4n-4A0A075B615 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4n-4A0A075B615 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4n-4A0A075B615 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Trav4n-4A0A075B615 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4n-4A0A075B615 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4n-4A0A075B615 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav4n-4A0A075B615 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4n-4A0A075B615 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4n-4A0A075B615 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4n-4A0A075B615 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4n-4A0A075B615 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4n-4A0A075B615 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav4n-4A0A075B615 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4n-4A0A075B615 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4n-4A0A075B615 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4n-4A0A075B615 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC13.23□□□□□ -0.29
Trav4n-4A0A075B615 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4n-4A0A075B615 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4n-4A0A075B615 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Trav4n-4A0A075B615 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4n-4A0A075B615 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trav4n-4A0A075B615 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4n-4A0A075B615 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4n-4A0A075B615 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav4n-4A0A075B615 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4n-4A0A075B615 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4n-4A0A075B615 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4n-4A0A075B615 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4n-4A0A075B615 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4n-4A0A075B615 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trav4n-4A0A075B615 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4n-4A0A075B615 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4n-4A0A075B615 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4n-4A0A075B615 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4n-4A0A075B615 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4n-4A0A075B615 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4n-4A0A075B615 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav4n-4A0A075B615 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4n-4A0A075B615 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4n-4A0A075B615 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav4n-4A0A075B615 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4n-4A0A075B615 Fst-202ENSMUST00000223640 2612 ntBASIC13.22□□□□□ -0.29
Trav4n-4A0A075B615 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav4n-4A0A075B615 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav4n-4A0A075B615 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav4n-4A0A075B615 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms