Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13d-1A0A075B606 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13d-1A0A075B606 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13d-1A0A075B606 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13d-1A0A075B606 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trav13d-1A0A075B606 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13d-1A0A075B606 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trav13d-1A0A075B606 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trav13d-1A0A075B606 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13d-1A0A075B606 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13d-1A0A075B606 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13d-1A0A075B606 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13d-1A0A075B606 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13d-1A0A075B606 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13d-1A0A075B606 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC13.93□□□□□ -0.18
Trav13d-1A0A075B606 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trav13d-1A0A075B606 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13d-1A0A075B606 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13d-1A0A075B606 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav13d-1A0A075B606 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC13.92□□□□□ -0.18
Trav13d-1A0A075B606 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-1A0A075B606 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-1A0A075B606 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-1A0A075B606 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-1A0A075B606 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-1A0A075B606 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-1A0A075B606 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-1A0A075B606 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-1A0A075B606 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-1A0A075B606 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-1A0A075B606 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC13.92□□□□□ -0.18
Trav13d-1A0A075B606 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Trav13d-1A0A075B606 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-1A0A075B606 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC13.92□□□□□ -0.18
Trav13d-1A0A075B606 Gm29257-201ENSMUST00000186115 639 ntBASIC13.92□□□□□ -0.18
Trav13d-1A0A075B606 AV356131-201ENSMUST00000206201 750 ntBASIC13.92□□□□□ -0.18
Trav13d-1A0A075B606 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-1A0A075B606 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-1A0A075B606 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC13.92□□□□□ -0.18
Trav13d-1A0A075B606 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-1A0A075B606 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Trav13d-1A0A075B606 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav13d-1A0A075B606 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-1A0A075B606 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-1A0A075B606 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-1A0A075B606 Gm14281-201ENSMUST00000121700 1294 ntBASIC13.91□□□□□ -0.18
Trav13d-1A0A075B606 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC13.91□□□□□ -0.18
Trav13d-1A0A075B606 Gm10033-202ENSMUST00000211874 928 ntBASIC13.91□□□□□ -0.18
Trav13d-1A0A075B606 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trav13d-1A0A075B606 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC13.91□□□□□ -0.18
Trav13d-1A0A075B606 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-1A0A075B606 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-1A0A075B606 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav13d-1A0A075B606 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-1A0A075B606 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-1A0A075B606 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Trav13d-1A0A075B606 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav13d-1A0A075B606 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-1A0A075B606 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-1A0A075B606 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-1A0A075B606 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-1A0A075B606 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-1A0A075B606 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-1A0A075B606 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-1A0A075B606 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trav13d-1A0A075B606 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-1A0A075B606 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-1A0A075B606 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC13.9□□□□□ -0.18
Trav13d-1A0A075B606 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC13.9□□□□□ -0.18
Trav13d-1A0A075B606 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav13d-1A0A075B606 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Trav13d-1A0A075B606 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-1A0A075B606 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trav13d-1A0A075B606 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Trav13d-1A0A075B606 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-1A0A075B606 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-1A0A075B606 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-1A0A075B606 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-1A0A075B606 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-1A0A075B606 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trav13d-1A0A075B606 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-1A0A075B606 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-1A0A075B606 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC13.9□□□□□ -0.18
Trav13d-1A0A075B606 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-1A0A075B606 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav13d-1A0A075B606 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trav13d-1A0A075B606 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC13.9□□□□□ -0.19
Trav13d-1A0A075B606 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13d-1A0A075B606 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13d-1A0A075B606 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13d-1A0A075B606 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13d-1A0A075B606 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13d-1A0A075B606 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC13.89□□□□□ -0.19
Trav13d-1A0A075B606 Gm10849-201ENSMUST00000100397 618 ntBASIC13.89□□□□□ -0.19
Trav13d-1A0A075B606 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC13.89□□□□□ -0.19
Trav13d-1A0A075B606 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13d-1A0A075B606 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
Trav13d-1A0A075B606 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13d-1A0A075B606 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav13d-1A0A075B606 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms