Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-6A0A075B603 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-6A0A075B603 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-6A0A075B603 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-6A0A075B603 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-6A0A075B603 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-6A0A075B603 Gm15546-201ENSMUST00000122095 826 ntBASIC14.17□□□□□ -0.14
Trav6-6A0A075B603 Gm43530-201ENSMUST00000195920 274 ntBASIC14.17□□□□□ -0.14
Trav6-6A0A075B603 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Trav6-6A0A075B603 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trav6-6A0A075B603 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-6A0A075B603 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-6A0A075B603 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-6A0A075B603 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-6A0A075B603 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-6A0A075B603 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trav6-6A0A075B603 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-6A0A075B603 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-6A0A075B603 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Trav6-6A0A075B603 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav6-6A0A075B603 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-6A0A075B603 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-6A0A075B603 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trav6-6A0A075B603 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC14.16□□□□□ -0.14
Trav6-6A0A075B603 Etf1-202ENSMUST00000180351 108 ntBASIC14.16□□□□□ -0.14
Trav6-6A0A075B603 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-6A0A075B603 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-6A0A075B603 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-6A0A075B603 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trav6-6A0A075B603 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-6A0A075B603 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-6A0A075B603 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-6A0A075B603 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trav6-6A0A075B603 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-6A0A075B603 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-6A0A075B603 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-6A0A075B603 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-6A0A075B603 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-6A0A075B603 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-6A0A075B603 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-6A0A075B603 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-6A0A075B603 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-6A0A075B603 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav6-6A0A075B603 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.15□□□□□ -0.14
Trav6-6A0A075B603 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav6-6A0A075B603 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-6A0A075B603 BC021767-201ENSMUST00000126387 1716 ntBASIC14.15□□□□□ -0.14
Trav6-6A0A075B603 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-6A0A075B603 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-6A0A075B603 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6-6A0A075B603 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trav6-6A0A075B603 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-6A0A075B603 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-6A0A075B603 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-6A0A075B603 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-6A0A075B603 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
Trav6-6A0A075B603 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-6A0A075B603 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC14.14□□□□□ -0.15
Trav6-6A0A075B603 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-6A0A075B603 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-6A0A075B603 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-6A0A075B603 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-6A0A075B603 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-6A0A075B603 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-6A0A075B603 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-6A0A075B603 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6-6A0A075B603 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Trav6-6A0A075B603 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-6A0A075B603 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-6A0A075B603 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-6A0A075B603 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-6A0A075B603 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-6A0A075B603 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-6A0A075B603 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC14.13□□□□□ -0.15
Trav6-6A0A075B603 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-6A0A075B603 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC14.13□□□□□ -0.15
Trav6-6A0A075B603 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trav6-6A0A075B603 Gm10657-201ENSMUST00000193528 1031 ntBASIC14.13□□□□□ -0.15
Trav6-6A0A075B603 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-6A0A075B603 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trav6-6A0A075B603 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-6A0A075B603 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav6-6A0A075B603 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-6A0A075B603 Fst-202ENSMUST00000223640 2612 ntBASIC14.13□□□□□ -0.15
Trav6-6A0A075B603 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trav6-6A0A075B603 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trav6-6A0A075B603 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.12□□□□□ -0.15
Trav6-6A0A075B603 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-6A0A075B603 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-6A0A075B603 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-6A0A075B603 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trav6-6A0A075B603 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-6A0A075B603 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-6A0A075B603 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-6A0A075B603 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-6A0A075B603 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
Trav6-6A0A075B603 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trav6-6A0A075B603 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-6A0A075B603 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-6A0A075B603 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms