Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav6-1A0A075B5Z8 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-1A0A075B5Z8 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-1A0A075B5Z8 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-1A0A075B5Z8 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trav6-1A0A075B5Z8 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trav6-1A0A075B5Z8 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-1A0A075B5Z8 Gm22238-201ENSMUST00000175222 88 ntBASIC15.3■□□□□ 0.04
Trav6-1A0A075B5Z8 Gm5522-201ENSMUST00000189483 1242 ntBASIC15.3■□□□□ 0.04
Trav6-1A0A075B5Z8 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-1A0A075B5Z8 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-1A0A075B5Z8 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-1A0A075B5Z8 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-1A0A075B5Z8 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-1A0A075B5Z8 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.3■□□□□ 0.04
Trav6-1A0A075B5Z8 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trav6-1A0A075B5Z8 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav6-1A0A075B5Z8 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trav6-1A0A075B5Z8 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-1A0A075B5Z8 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-1A0A075B5Z8 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trav6-1A0A075B5Z8 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
Trav6-1A0A075B5Z8 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-1A0A075B5Z8 Grk6-206ENSMUST00000224995 2971 ntBASIC15.29■□□□□ 0.04
Trav6-1A0A075B5Z8 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.29■□□□□ 0.04
Trav6-1A0A075B5Z8 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-1A0A075B5Z8 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-1A0A075B5Z8 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-1A0A075B5Z8 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-1A0A075B5Z8 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC15.29■□□□□ 0.04
Trav6-1A0A075B5Z8 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-1A0A075B5Z8 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-1A0A075B5Z8 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-1A0A075B5Z8 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-1A0A075B5Z8 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Trav6-1A0A075B5Z8 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-1A0A075B5Z8 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trav6-1A0A075B5Z8 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Trav6-1A0A075B5Z8 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav6-1A0A075B5Z8 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6-1A0A075B5Z8 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6-1A0A075B5Z8 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Trav6-1A0A075B5Z8 Gm15853-202ENSMUST00000195518 2041 ntBASIC15.28■□□□□ 0.04
Trav6-1A0A075B5Z8 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6-1A0A075B5Z8 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6-1A0A075B5Z8 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6-1A0A075B5Z8 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC15.28■□□□□ 0.04
Trav6-1A0A075B5Z8 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC15.28■□□□□ 0.04
Trav6-1A0A075B5Z8 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6-1A0A075B5Z8 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6-1A0A075B5Z8 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6-1A0A075B5Z8 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav6-1A0A075B5Z8 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav6-1A0A075B5Z8 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.28■□□□□ 0.04
Trav6-1A0A075B5Z8 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Trav6-1A0A075B5Z8 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6-1A0A075B5Z8 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6-1A0A075B5Z8 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6-1A0A075B5Z8 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6-1A0A075B5Z8 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6-1A0A075B5Z8 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trav6-1A0A075B5Z8 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6-1A0A075B5Z8 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav6-1A0A075B5Z8 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Trav6-1A0A075B5Z8 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC15.27■□□□□ 0.04
Trav6-1A0A075B5Z8 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC15.27■□□□□ 0.04
Trav6-1A0A075B5Z8 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav6-1A0A075B5Z8 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav6-1A0A075B5Z8 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav6-1A0A075B5Z8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav6-1A0A075B5Z8 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav6-1A0A075B5Z8 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Trav6-1A0A075B5Z8 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-1A0A075B5Z8 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-1A0A075B5Z8 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-1A0A075B5Z8 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-1A0A075B5Z8 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trav6-1A0A075B5Z8 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-1A0A075B5Z8 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-1A0A075B5Z8 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-1A0A075B5Z8 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trav6-1A0A075B5Z8 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-1A0A075B5Z8 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav6-1A0A075B5Z8 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
Trav6-1A0A075B5Z8 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-1A0A075B5Z8 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-1A0A075B5Z8 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
Trav6-1A0A075B5Z8 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav6-1A0A075B5Z8 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trav6-1A0A075B5Z8 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6-1A0A075B5Z8 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6-1A0A075B5Z8 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav6-1A0A075B5Z8 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6-1A0A075B5Z8 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6-1A0A075B5Z8 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav6-1A0A075B5Z8 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav6-1A0A075B5Z8 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.25■□□□□ 0.03
Trav6-1A0A075B5Z8 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav6-1A0A075B5Z8 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trav6-1A0A075B5Z8 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms