Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trav5-1A0A075B5Z7 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Trav5-1A0A075B5Z7 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav5-1A0A075B5Z7 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trav5-1A0A075B5Z7 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav5-1A0A075B5Z7 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav5-1A0A075B5Z7 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.38■□□□□ 0.21
Trav5-1A0A075B5Z7 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Trav5-1A0A075B5Z7 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.38■□□□□ 0.21
Trav5-1A0A075B5Z7 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav5-1A0A075B5Z7 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav5-1A0A075B5Z7 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav5-1A0A075B5Z7 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav5-1A0A075B5Z7 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav5-1A0A075B5Z7 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav5-1A0A075B5Z7 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Trav5-1A0A075B5Z7 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.37■□□□□ 0.21
Trav5-1A0A075B5Z7 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav5-1A0A075B5Z7 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav5-1A0A075B5Z7 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav5-1A0A075B5Z7 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav5-1A0A075B5Z7 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav5-1A0A075B5Z7 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav5-1A0A075B5Z7 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav5-1A0A075B5Z7 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav5-1A0A075B5Z7 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.37■□□□□ 0.21
Trav5-1A0A075B5Z7 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav5-1A0A075B5Z7 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav5-1A0A075B5Z7 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.36■□□□□ 0.21
Trav5-1A0A075B5Z7 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav5-1A0A075B5Z7 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav5-1A0A075B5Z7 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Trav5-1A0A075B5Z7 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav5-1A0A075B5Z7 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav5-1A0A075B5Z7 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav5-1A0A075B5Z7 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav5-1A0A075B5Z7 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.36■□□□□ 0.21
Trav5-1A0A075B5Z7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav5-1A0A075B5Z7 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav5-1A0A075B5Z7 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav5-1A0A075B5Z7 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav5-1A0A075B5Z7 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav5-1A0A075B5Z7 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav5-1A0A075B5Z7 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav5-1A0A075B5Z7 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav5-1A0A075B5Z7 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav5-1A0A075B5Z7 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.35■□□□□ 0.21
Trav5-1A0A075B5Z7 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav5-1A0A075B5Z7 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Trav5-1A0A075B5Z7 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav5-1A0A075B5Z7 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Trav5-1A0A075B5Z7 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.35■□□□□ 0.21
Trav5-1A0A075B5Z7 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.35■□□□□ 0.21
Trav5-1A0A075B5Z7 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav5-1A0A075B5Z7 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav5-1A0A075B5Z7 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.35■□□□□ 0.21
Trav5-1A0A075B5Z7 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav5-1A0A075B5Z7 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav5-1A0A075B5Z7 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav5-1A0A075B5Z7 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav5-1A0A075B5Z7 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav5-1A0A075B5Z7 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav5-1A0A075B5Z7 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav5-1A0A075B5Z7 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav5-1A0A075B5Z7 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Trav5-1A0A075B5Z7 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav5-1A0A075B5Z7 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trav5-1A0A075B5Z7 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
Trav5-1A0A075B5Z7 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav5-1A0A075B5Z7 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav5-1A0A075B5Z7 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav5-1A0A075B5Z7 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trav5-1A0A075B5Z7 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav5-1A0A075B5Z7 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav5-1A0A075B5Z7 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav5-1A0A075B5Z7 Gm7290-201ENSMUST00000104990 617 ntBASIC16.33■□□□□ 0.2
Trav5-1A0A075B5Z7 Gm12918-201ENSMUST00000120234 636 ntBASIC16.33■□□□□ 0.2
Trav5-1A0A075B5Z7 Gm15710-201ENSMUST00000121821 636 ntBASIC16.33■□□□□ 0.2
Trav5-1A0A075B5Z7 Gm5075-201ENSMUST00000196916 622 ntBASIC16.33■□□□□ 0.2
Trav5-1A0A075B5Z7 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.33■□□□□ 0.2
Trav5-1A0A075B5Z7 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Trav5-1A0A075B5Z7 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC16.33■□□□□ 0.2
Trav5-1A0A075B5Z7 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC16.33■□□□□ 0.2
Trav5-1A0A075B5Z7 Gm10602-201ENSMUST00000098239 609 ntBASIC16.33■□□□□ 0.2
Trav5-1A0A075B5Z7 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Trav5-1A0A075B5Z7 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav5-1A0A075B5Z7 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav5-1A0A075B5Z7 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav5-1A0A075B5Z7 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav5-1A0A075B5Z7 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trav5-1A0A075B5Z7 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.33■□□□□ 0.2
Trav5-1A0A075B5Z7 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav5-1A0A075B5Z7 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav5-1A0A075B5Z7 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav5-1A0A075B5Z7 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Trav5-1A0A075B5Z7 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.32■□□□□ 0.2
Trav5-1A0A075B5Z7 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trav5-1A0A075B5Z7 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trav5-1A0A075B5Z7 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav5-1A0A075B5Z7 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms