Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.14■□□□□ 0.33
H2afb3S4R1G7 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
H2afb3S4R1G7 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
H2afb3S4R1G7 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
H2afb3S4R1G7 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
H2afb3S4R1G7 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
H2afb3S4R1G7 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
H2afb3S4R1G7 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
H2afb3S4R1G7 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
H2afb3S4R1G7 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
H2afb3S4R1G7 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2afb3S4R1G7 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2afb3S4R1G7 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
H2afb3S4R1G7 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2afb3S4R1G7 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
H2afb3S4R1G7 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.13■□□□□ 0.33
H2afb3S4R1G7 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
H2afb3S4R1G7 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.13■□□□□ 0.33
H2afb3S4R1G7 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2afb3S4R1G7 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2afb3S4R1G7 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
H2afb3S4R1G7 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2afb3S4R1G7 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2afb3S4R1G7 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
H2afb3S4R1G7 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
H2afb3S4R1G7 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
H2afb3S4R1G7 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
H2afb3S4R1G7 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afb3S4R1G7 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afb3S4R1G7 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
H2afb3S4R1G7 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afb3S4R1G7 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
H2afb3S4R1G7 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.12■□□□□ 0.33
H2afb3S4R1G7 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afb3S4R1G7 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afb3S4R1G7 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afb3S4R1G7 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afb3S4R1G7 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.12■□□□□ 0.33
H2afb3S4R1G7 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
H2afb3S4R1G7 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
H2afb3S4R1G7 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
H2afb3S4R1G7 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.12■□□□□ 0.33
H2afb3S4R1G7 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2afb3S4R1G7 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2afb3S4R1G7 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2afb3S4R1G7 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
H2afb3S4R1G7 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2afb3S4R1G7 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2afb3S4R1G7 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
H2afb3S4R1G7 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
H2afb3S4R1G7 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
H2afb3S4R1G7 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
H2afb3S4R1G7 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.11■□□□□ 0.33
H2afb3S4R1G7 Gm9847-201ENSMUST00000052528 599 ntBASIC17.11■□□□□ 0.33
H2afb3S4R1G7 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2afb3S4R1G7 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.11■□□□□ 0.33
H2afb3S4R1G7 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
H2afb3S4R1G7 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
H2afb3S4R1G7 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
H2afb3S4R1G7 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
H2afb3S4R1G7 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
H2afb3S4R1G7 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
H2afb3S4R1G7 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
H2afb3S4R1G7 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
H2afb3S4R1G7 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
H2afb3S4R1G7 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
H2afb3S4R1G7 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
H2afb3S4R1G7 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
H2afb3S4R1G7 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
H2afb3S4R1G7 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.1■□□□□ 0.33
H2afb3S4R1G7 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
H2afb3S4R1G7 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
H2afb3S4R1G7 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
H2afb3S4R1G7 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
H2afb3S4R1G7 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
H2afb3S4R1G7 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
H2afb3S4R1G7 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
H2afb3S4R1G7 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.09■□□□□ 0.33
H2afb3S4R1G7 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
H2afb3S4R1G7 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
H2afb3S4R1G7 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
H2afb3S4R1G7 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
H2afb3S4R1G7 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
H2afb3S4R1G7 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
H2afb3S4R1G7 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
H2afb3S4R1G7 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
H2afb3S4R1G7 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
H2afb3S4R1G7 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
H2afb3S4R1G7 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
H2afb3S4R1G7 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.08■□□□□ 0.32
H2afb3S4R1G7 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
H2afb3S4R1G7 Serp2-204ENSMUST00000228055 705 ntBASIC17.08■□□□□ 0.32
H2afb3S4R1G7 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
H2afb3S4R1G7 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
H2afb3S4R1G7 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
H2afb3S4R1G7 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
H2afb3S4R1G7 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.07■□□□□ 0.32
H2afb3S4R1G7 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
H2afb3S4R1G7 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
H2afb3S4R1G7 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms