Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Cldn3Q9Z0G9 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn3Q9Z0G9 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn3Q9Z0G9 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn3Q9Z0G9 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cldn3Q9Z0G9 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn3Q9Z0G9 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn3Q9Z0G9 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn3Q9Z0G9 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn3Q9Z0G9 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn3Q9Z0G9 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Cldn3Q9Z0G9 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn3Q9Z0G9 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn3Q9Z0G9 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.3■□□□□ 0.68
Cldn3Q9Z0G9 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Cldn3Q9Z0G9 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cldn3Q9Z0G9 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cldn3Q9Z0G9 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cldn3Q9Z0G9 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cldn3Q9Z0G9 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Cldn3Q9Z0G9 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cldn3Q9Z0G9 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.29■□□□□ 0.68
Cldn3Q9Z0G9 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
Cldn3Q9Z0G9 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.29■□□□□ 0.68
Cldn3Q9Z0G9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cldn3Q9Z0G9 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.28■□□□□ 0.68
Cldn3Q9Z0G9 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
Cldn3Q9Z0G9 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn3Q9Z0G9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Cldn3Q9Z0G9 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn3Q9Z0G9 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn3Q9Z0G9 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.28■□□□□ 0.68
Cldn3Q9Z0G9 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn3Q9Z0G9 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn3Q9Z0G9 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.28■□□□□ 0.68
Cldn3Q9Z0G9 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn3Q9Z0G9 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn3Q9Z0G9 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn3Q9Z0G9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn3Q9Z0G9 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn3Q9Z0G9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cldn3Q9Z0G9 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Cldn3Q9Z0G9 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn3Q9Z0G9 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn3Q9Z0G9 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn3Q9Z0G9 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn3Q9Z0G9 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.27■□□□□ 0.68
Cldn3Q9Z0G9 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.27■□□□□ 0.68
Cldn3Q9Z0G9 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn3Q9Z0G9 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cldn3Q9Z0G9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Cldn3Q9Z0G9 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cldn3Q9Z0G9 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn3Q9Z0G9 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Cldn3Q9Z0G9 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn3Q9Z0G9 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn3Q9Z0G9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn3Q9Z0G9 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn3Q9Z0G9 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cldn3Q9Z0G9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn3Q9Z0G9 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC19.25■□□□□ 0.67
Cldn3Q9Z0G9 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Cldn3Q9Z0G9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Cldn3Q9Z0G9 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Cldn3Q9Z0G9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
Cldn3Q9Z0G9 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Cldn3Q9Z0G9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn3Q9Z0G9 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn3Q9Z0G9 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.25■□□□□ 0.67
Cldn3Q9Z0G9 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC19.25■□□□□ 0.67
Cldn3Q9Z0G9 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn3Q9Z0G9 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Cldn3Q9Z0G9 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cldn3Q9Z0G9 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cldn3Q9Z0G9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cldn3Q9Z0G9 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.24■□□□□ 0.67
Cldn3Q9Z0G9 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cldn3Q9Z0G9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cldn3Q9Z0G9 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cldn3Q9Z0G9 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.24■□□□□ 0.67
Cldn3Q9Z0G9 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.24■□□□□ 0.67
Cldn3Q9Z0G9 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cldn3Q9Z0G9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cldn3Q9Z0G9 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.24■□□□□ 0.67
Cldn3Q9Z0G9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Cldn3Q9Z0G9 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.24■□□□□ 0.67
Cldn3Q9Z0G9 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Cldn3Q9Z0G9 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Cldn3Q9Z0G9 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.24■□□□□ 0.67
Cldn3Q9Z0G9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn3Q9Z0G9 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn3Q9Z0G9 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn3Q9Z0G9 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn3Q9Z0G9 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn3Q9Z0G9 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC19.23■□□□□ 0.67
Cldn3Q9Z0G9 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.23■□□□□ 0.67
Cldn3Q9Z0G9 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn3Q9Z0G9 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Cldn3Q9Z0G9 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Cldn3Q9Z0G9 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms