Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn8aQ9WTU3 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Scn8aQ9WTU3 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.41■□□□□ 0.7
Scn8aQ9WTU3 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn8aQ9WTU3 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Scn8aQ9WTU3 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn8aQ9WTU3 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn8aQ9WTU3 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
Scn8aQ9WTU3 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn8aQ9WTU3 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn8aQ9WTU3 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn8aQ9WTU3 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Scn8aQ9WTU3 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Scn8aQ9WTU3 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn8aQ9WTU3 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Scn8aQ9WTU3 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn8aQ9WTU3 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Scn8aQ9WTU3 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Scn8aQ9WTU3 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.39■□□□□ 0.7
Scn8aQ9WTU3 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Scn8aQ9WTU3 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Scn8aQ9WTU3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Scn8aQ9WTU3 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.39■□□□□ 0.7
Scn8aQ9WTU3 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn8aQ9WTU3 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.39■□□□□ 0.69
Scn8aQ9WTU3 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Scn8aQ9WTU3 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Scn8aQ9WTU3 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn8aQ9WTU3 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Scn8aQ9WTU3 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Scn8aQ9WTU3 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Scn8aQ9WTU3 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn8aQ9WTU3 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Scn8aQ9WTU3 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Scn8aQ9WTU3 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Scn8aQ9WTU3 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Scn8aQ9WTU3 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Scn8aQ9WTU3 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.37■□□□□ 0.69
Scn8aQ9WTU3 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.37■□□□□ 0.69
Scn8aQ9WTU3 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Scn8aQ9WTU3 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Scn8aQ9WTU3 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn8aQ9WTU3 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Scn8aQ9WTU3 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.36■□□□□ 0.69
Scn8aQ9WTU3 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.36■□□□□ 0.69
Scn8aQ9WTU3 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Scn8aQ9WTU3 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.35■□□□□ 0.69
Scn8aQ9WTU3 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Scn8aQ9WTU3 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scn8aQ9WTU3 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scn8aQ9WTU3 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scn8aQ9WTU3 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scn8aQ9WTU3 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Scn8aQ9WTU3 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Scn8aQ9WTU3 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scn8aQ9WTU3 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scn8aQ9WTU3 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.35■□□□□ 0.69
Scn8aQ9WTU3 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Scn8aQ9WTU3 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Scn8aQ9WTU3 Mir5133-201ENSMUST00000174955 77 ntBASIC19.35■□□□□ 0.69
Scn8aQ9WTU3 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.35■□□□□ 0.69
Scn8aQ9WTU3 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scn8aQ9WTU3 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scn8aQ9WTU3 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scn8aQ9WTU3 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scn8aQ9WTU3 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scn8aQ9WTU3 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.34■□□□□ 0.69
Scn8aQ9WTU3 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.34■□□□□ 0.69
Scn8aQ9WTU3 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.34■□□□□ 0.69
Scn8aQ9WTU3 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scn8aQ9WTU3 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Scn8aQ9WTU3 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scn8aQ9WTU3 Golph3-202ENSMUST00000226517 2359 ntBASIC19.34■□□□□ 0.69
Scn8aQ9WTU3 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scn8aQ9WTU3 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scn8aQ9WTU3 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Scn8aQ9WTU3 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.33■□□□□ 0.69
Scn8aQ9WTU3 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Scn8aQ9WTU3 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Scn8aQ9WTU3 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Scn8aQ9WTU3 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Scn8aQ9WTU3 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Scn8aQ9WTU3 Gm7290-201ENSMUST00000104990 617 ntBASIC19.33■□□□□ 0.68
Scn8aQ9WTU3 Gm12918-201ENSMUST00000120234 636 ntBASIC19.33■□□□□ 0.68
Scn8aQ9WTU3 Gm15710-201ENSMUST00000121821 636 ntBASIC19.33■□□□□ 0.68
Scn8aQ9WTU3 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.33■□□□□ 0.68
Scn8aQ9WTU3 Gm5075-201ENSMUST00000196916 622 ntBASIC19.33■□□□□ 0.68
Scn8aQ9WTU3 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.33■□□□□ 0.68
Scn8aQ9WTU3 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Scn8aQ9WTU3 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.33■□□□□ 0.68
Scn8aQ9WTU3 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.33■□□□□ 0.68
Scn8aQ9WTU3 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Scn8aQ9WTU3 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Scn8aQ9WTU3 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Scn8aQ9WTU3 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Scn8aQ9WTU3 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scn8aQ9WTU3 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Scn8aQ9WTU3 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scn8aQ9WTU3 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Scn8aQ9WTU3 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms