Protein–RNA interactions for Protein: Q9QZS2

Rnf4, E3 ubiquitin-protein ligase RNF4, mousemouse

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4Q9QZS2 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.3■□□□□ 0.68
Rnf4Q9QZS2 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf4Q9QZS2 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf4Q9QZS2 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC19.3■□□□□ 0.68
Rnf4Q9QZS2 Gm12366-201ENSMUST00000121722 873 ntBASIC19.3■□□□□ 0.68
Rnf4Q9QZS2 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC19.3■□□□□ 0.68
Rnf4Q9QZS2 Gm10399-202ENSMUST00000202768 748 ntBASIC19.3■□□□□ 0.68
Rnf4Q9QZS2 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf4Q9QZS2 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC19.3■□□□□ 0.68
Rnf4Q9QZS2 Gm5786-201ENSMUST00000085368 882 ntBASIC19.3■□□□□ 0.68
Rnf4Q9QZS2 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf4Q9QZS2 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf4Q9QZS2 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf4Q9QZS2 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf4Q9QZS2 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.3■□□□□ 0.68
Rnf4Q9QZS2 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.3■□□□□ 0.68
Rnf4Q9QZS2 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.3■□□□□ 0.68
Rnf4Q9QZS2 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf4Q9QZS2 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rnf4Q9QZS2 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Rnf4Q9QZS2 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Rnf4Q9QZS2 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.29■□□□□ 0.68
Rnf4Q9QZS2 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf4Q9QZS2 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf4Q9QZS2 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf4Q9QZS2 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf4Q9QZS2 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Rnf4Q9QZS2 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf4Q9QZS2 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf4Q9QZS2 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf4Q9QZS2 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf4Q9QZS2 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rnf4Q9QZS2 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf4Q9QZS2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf4Q9QZS2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf4Q9QZS2 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf4Q9QZS2 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf4Q9QZS2 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf4Q9QZS2 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Rnf4Q9QZS2 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf4Q9QZS2 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf4Q9QZS2 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Rnf4Q9QZS2 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rnf4Q9QZS2 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Rnf4Q9QZS2 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.28■□□□□ 0.68
Rnf4Q9QZS2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Rnf4Q9QZS2 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf4Q9QZS2 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf4Q9QZS2 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf4Q9QZS2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.27■□□□□ 0.68
Rnf4Q9QZS2 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf4Q9QZS2 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf4Q9QZS2 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf4Q9QZS2 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.27■□□□□ 0.68
Rnf4Q9QZS2 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rnf4Q9QZS2 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rnf4Q9QZS2 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
Rnf4Q9QZS2 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Rnf4Q9QZS2 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.26■□□□□ 0.67
Rnf4Q9QZS2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf4Q9QZS2 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf4Q9QZS2 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Rnf4Q9QZS2 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.26■□□□□ 0.67
Rnf4Q9QZS2 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf4Q9QZS2 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf4Q9QZS2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf4Q9QZS2 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf4Q9QZS2 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Rnf4Q9QZS2 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rnf4Q9QZS2 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Rnf4Q9QZS2 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf4Q9QZS2 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf4Q9QZS2 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf4Q9QZS2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf4Q9QZS2 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf4Q9QZS2 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf4Q9QZS2 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf4Q9QZS2 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.25■□□□□ 0.67
Rnf4Q9QZS2 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf4Q9QZS2 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf4Q9QZS2 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rnf4Q9QZS2 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf4Q9QZS2 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.24■□□□□ 0.67
Rnf4Q9QZS2 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf4Q9QZS2 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Rnf4Q9QZS2 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf4Q9QZS2 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Rnf4Q9QZS2 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf4Q9QZS2 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC19.24■□□□□ 0.67
Rnf4Q9QZS2 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.24■□□□□ 0.67
Rnf4Q9QZS2 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf4Q9QZS2 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf4Q9QZS2 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rnf4Q9QZS2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.23■□□□□ 0.67
Rnf4Q9QZS2 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf4Q9QZS2 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.23■□□□□ 0.67
Rnf4Q9QZS2 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Rnf4Q9QZS2 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf4Q9QZS2 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rnf4Q9QZS2 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms