Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcf1Q9QZM3 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcf1Q9QZM3 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcf1Q9QZM3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Clcf1Q9QZM3 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcf1Q9QZM3 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcf1Q9QZM3 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcf1Q9QZM3 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcf1Q9QZM3 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcf1Q9QZM3 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcf1Q9QZM3 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Clcf1Q9QZM3 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcf1Q9QZM3 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Clcf1Q9QZM3 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Clcf1Q9QZM3 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcf1Q9QZM3 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.3■□□□□ 0.36
Clcf1Q9QZM3 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcf1Q9QZM3 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcf1Q9QZM3 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcf1Q9QZM3 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcf1Q9QZM3 Gm10849-201ENSMUST00000100397 618 ntBASIC17.3■□□□□ 0.36
Clcf1Q9QZM3 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.3■□□□□ 0.36
Clcf1Q9QZM3 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Clcf1Q9QZM3 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.3■□□□□ 0.36
Clcf1Q9QZM3 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Clcf1Q9QZM3 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Clcf1Q9QZM3 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcf1Q9QZM3 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Clcf1Q9QZM3 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Clcf1Q9QZM3 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcf1Q9QZM3 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcf1Q9QZM3 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.29■□□□□ 0.36
Clcf1Q9QZM3 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Clcf1Q9QZM3 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.29■□□□□ 0.36
Clcf1Q9QZM3 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcf1Q9QZM3 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.29■□□□□ 0.36
Clcf1Q9QZM3 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcf1Q9QZM3 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Clcf1Q9QZM3 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clcf1Q9QZM3 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clcf1Q9QZM3 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clcf1Q9QZM3 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Clcf1Q9QZM3 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.28■□□□□ 0.36
Clcf1Q9QZM3 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Clcf1Q9QZM3 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.28■□□□□ 0.36
Clcf1Q9QZM3 Gm42569-201ENSMUST00000200539 472 ntBASIC17.28■□□□□ 0.36
Clcf1Q9QZM3 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.28■□□□□ 0.36
Clcf1Q9QZM3 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clcf1Q9QZM3 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Clcf1Q9QZM3 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Clcf1Q9QZM3 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clcf1Q9QZM3 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC17.28■□□□□ 0.36
Clcf1Q9QZM3 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Clcf1Q9QZM3 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Clcf1Q9QZM3 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.27■□□□□ 0.36
Clcf1Q9QZM3 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.27■□□□□ 0.36
Clcf1Q9QZM3 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Clcf1Q9QZM3 Gm10033-202ENSMUST00000211874 928 ntBASIC17.27■□□□□ 0.36
Clcf1Q9QZM3 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Clcf1Q9QZM3 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Clcf1Q9QZM3 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Clcf1Q9QZM3 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Clcf1Q9QZM3 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Clcf1Q9QZM3 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clcf1Q9QZM3 Gm18671-201ENSMUST00000214826 683 ntBASIC17.26■□□□□ 0.35
Clcf1Q9QZM3 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clcf1Q9QZM3 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Clcf1Q9QZM3 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clcf1Q9QZM3 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Clcf1Q9QZM3 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clcf1Q9QZM3 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clcf1Q9QZM3 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcf1Q9QZM3 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.25■□□□□ 0.35
Clcf1Q9QZM3 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Clcf1Q9QZM3 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcf1Q9QZM3 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Clcf1Q9QZM3 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcf1Q9QZM3 Gm7291-201ENSMUST00000199147 382 ntBASIC17.25■□□□□ 0.35
Clcf1Q9QZM3 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Clcf1Q9QZM3 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Clcf1Q9QZM3 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcf1Q9QZM3 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Clcf1Q9QZM3 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcf1Q9QZM3 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcf1Q9QZM3 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Clcf1Q9QZM3 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcf1Q9QZM3 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC17.24■□□□□ 0.35
Clcf1Q9QZM3 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcf1Q9QZM3 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcf1Q9QZM3 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Clcf1Q9QZM3 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Clcf1Q9QZM3 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcf1Q9QZM3 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.24■□□□□ 0.35
Clcf1Q9QZM3 Gm27405-201ENSMUST00000184201 112 ntBASIC17.24■□□□□ 0.35
Clcf1Q9QZM3 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.24■□□□□ 0.35
Clcf1Q9QZM3 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcf1Q9QZM3 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcf1Q9QZM3 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcf1Q9QZM3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Clcf1Q9QZM3 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms