Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sec61a2Q9JLR1 Spcs1-204ENSMUST00000226782 949 ntBASIC17.17■□□□□ 0.34
Sec61a2Q9JLR1 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sec61a2Q9JLR1 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sec61a2Q9JLR1 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.17■□□□□ 0.34
Sec61a2Q9JLR1 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.17■□□□□ 0.34
Sec61a2Q9JLR1 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sec61a2Q9JLR1 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sec61a2Q9JLR1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sec61a2Q9JLR1 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sec61a2Q9JLR1 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sec61a2Q9JLR1 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Sec61a2Q9JLR1 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sec61a2Q9JLR1 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.16■□□□□ 0.34
Sec61a2Q9JLR1 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sec61a2Q9JLR1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.16■□□□□ 0.34
Sec61a2Q9JLR1 Gm43173-201ENSMUST00000202246 593 ntBASIC17.16■□□□□ 0.34
Sec61a2Q9JLR1 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sec61a2Q9JLR1 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Sec61a2Q9JLR1 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Sec61a2Q9JLR1 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sec61a2Q9JLR1 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sec61a2Q9JLR1 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sec61a2Q9JLR1 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sec61a2Q9JLR1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sec61a2Q9JLR1 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sec61a2Q9JLR1 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC17.15■□□□□ 0.34
Sec61a2Q9JLR1 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Sec61a2Q9JLR1 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.15■□□□□ 0.34
Sec61a2Q9JLR1 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Sec61a2Q9JLR1 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.15■□□□□ 0.34
Sec61a2Q9JLR1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sec61a2Q9JLR1 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Sec61a2Q9JLR1 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Sec61a2Q9JLR1 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sec61a2Q9JLR1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sec61a2Q9JLR1 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sec61a2Q9JLR1 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.15■□□□□ 0.34
Sec61a2Q9JLR1 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Sec61a2Q9JLR1 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.14■□□□□ 0.33
Sec61a2Q9JLR1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.14■□□□□ 0.33
Sec61a2Q9JLR1 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Sec61a2Q9JLR1 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.14■□□□□ 0.33
Sec61a2Q9JLR1 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sec61a2Q9JLR1 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sec61a2Q9JLR1 Wdr70-203ENSMUST00000227371 1130 ntBASIC17.14■□□□□ 0.33
Sec61a2Q9JLR1 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.14■□□□□ 0.33
Sec61a2Q9JLR1 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sec61a2Q9JLR1 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sec61a2Q9JLR1 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sec61a2Q9JLR1 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sec61a2Q9JLR1 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sec61a2Q9JLR1 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sec61a2Q9JLR1 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sec61a2Q9JLR1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sec61a2Q9JLR1 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sec61a2Q9JLR1 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sec61a2Q9JLR1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sec61a2Q9JLR1 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC17.13■□□□□ 0.33
Sec61a2Q9JLR1 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC17.13■□□□□ 0.33
Sec61a2Q9JLR1 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Sec61a2Q9JLR1 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sec61a2Q9JLR1 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sec61a2Q9JLR1 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sec61a2Q9JLR1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Sec61a2Q9JLR1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sec61a2Q9JLR1 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.13■□□□□ 0.33
Sec61a2Q9JLR1 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sec61a2Q9JLR1 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC17.13■□□□□ 0.33
Sec61a2Q9JLR1 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sec61a2Q9JLR1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sec61a2Q9JLR1 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sec61a2Q9JLR1 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sec61a2Q9JLR1 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sec61a2Q9JLR1 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.12■□□□□ 0.33
Sec61a2Q9JLR1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sec61a2Q9JLR1 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sec61a2Q9JLR1 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Sec61a2Q9JLR1 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Sec61a2Q9JLR1 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sec61a2Q9JLR1 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sec61a2Q9JLR1 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Sec61a2Q9JLR1 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
Sec61a2Q9JLR1 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.12■□□□□ 0.33
Sec61a2Q9JLR1 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sec61a2Q9JLR1 AC154266.1-201ENSMUST00000223190 503 ntBASIC17.12■□□□□ 0.33
Sec61a2Q9JLR1 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sec61a2Q9JLR1 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sec61a2Q9JLR1 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.12■□□□□ 0.33
Sec61a2Q9JLR1 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Sec61a2Q9JLR1 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sec61a2Q9JLR1 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sec61a2Q9JLR1 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.12■□□□□ 0.33
Sec61a2Q9JLR1 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Sec61a2Q9JLR1 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sec61a2Q9JLR1 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Sec61a2Q9JLR1 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sec61a2Q9JLR1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sec61a2Q9JLR1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sec61a2Q9JLR1 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms