Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.96■□□□□ 0.79
Scn5aQ9JJV9 Gm32699-201ENSMUST00000221728 1988 ntBASIC19.96■□□□□ 0.79
Scn5aQ9JJV9 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Scn5aQ9JJV9 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Scn5aQ9JJV9 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scn5aQ9JJV9 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scn5aQ9JJV9 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Scn5aQ9JJV9 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scn5aQ9JJV9 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.95■□□□□ 0.78
Scn5aQ9JJV9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.95■□□□□ 0.78
Scn5aQ9JJV9 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scn5aQ9JJV9 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.95■□□□□ 0.78
Scn5aQ9JJV9 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Scn5aQ9JJV9 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Scn5aQ9JJV9 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.95■□□□□ 0.78
Scn5aQ9JJV9 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Scn5aQ9JJV9 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scn5aQ9JJV9 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.94■□□□□ 0.78
Scn5aQ9JJV9 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Scn5aQ9JJV9 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.94■□□□□ 0.78
Scn5aQ9JJV9 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scn5aQ9JJV9 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scn5aQ9JJV9 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Scn5aQ9JJV9 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Scn5aQ9JJV9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
Scn5aQ9JJV9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Scn5aQ9JJV9 Gm12896-201ENSMUST00000118430 226 ntBASIC19.93■□□□□ 0.78
Scn5aQ9JJV9 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Scn5aQ9JJV9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Scn5aQ9JJV9 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Scn5aQ9JJV9 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scn5aQ9JJV9 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Scn5aQ9JJV9 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scn5aQ9JJV9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scn5aQ9JJV9 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scn5aQ9JJV9 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Scn5aQ9JJV9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.93■□□□□ 0.78
Scn5aQ9JJV9 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Scn5aQ9JJV9 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Scn5aQ9JJV9 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Scn5aQ9JJV9 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn5aQ9JJV9 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Scn5aQ9JJV9 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.92■□□□□ 0.78
Scn5aQ9JJV9 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Scn5aQ9JJV9 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Scn5aQ9JJV9 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Scn5aQ9JJV9 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Scn5aQ9JJV9 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Scn5aQ9JJV9 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.92■□□□□ 0.78
Scn5aQ9JJV9 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Scn5aQ9JJV9 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn5aQ9JJV9 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn5aQ9JJV9 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Scn5aQ9JJV9 Gm715-201ENSMUST00000117865 831 ntBASIC19.91■□□□□ 0.78
Scn5aQ9JJV9 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Scn5aQ9JJV9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn5aQ9JJV9 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Scn5aQ9JJV9 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.9■□□□□ 0.78
Scn5aQ9JJV9 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn5aQ9JJV9 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Scn5aQ9JJV9 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn5aQ9JJV9 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Scn5aQ9JJV9 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Scn5aQ9JJV9 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn5aQ9JJV9 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn5aQ9JJV9 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn5aQ9JJV9 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Scn5aQ9JJV9 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn5aQ9JJV9 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn5aQ9JJV9 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Scn5aQ9JJV9 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Scn5aQ9JJV9 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn5aQ9JJV9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn5aQ9JJV9 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn5aQ9JJV9 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.88■□□□□ 0.77
Scn5aQ9JJV9 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.88■□□□□ 0.77
Scn5aQ9JJV9 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.88■□□□□ 0.77
Scn5aQ9JJV9 Gm2559-201ENSMUST00000201323 363 ntBASIC19.88■□□□□ 0.77
Scn5aQ9JJV9 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.88■□□□□ 0.77
Scn5aQ9JJV9 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn5aQ9JJV9 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Scn5aQ9JJV9 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Scn5aQ9JJV9 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Scn5aQ9JJV9 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn5aQ9JJV9 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn5aQ9JJV9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Scn5aQ9JJV9 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Scn5aQ9JJV9 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Scn5aQ9JJV9 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn5aQ9JJV9 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn5aQ9JJV9 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Scn5aQ9JJV9 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Scn5aQ9JJV9 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Scn5aQ9JJV9 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.86■□□□□ 0.77
Scn5aQ9JJV9 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
Scn5aQ9JJV9 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn5aQ9JJV9 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Scn5aQ9JJV9 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn5aQ9JJV9 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Scn5aQ9JJV9 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms