Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tubb3Q9ERD7 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.99■□□□□ 0.63
Tubb3Q9ERD7 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tubb3Q9ERD7 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Tubb3Q9ERD7 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tubb3Q9ERD7 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Tubb3Q9ERD7 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tubb3Q9ERD7 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tubb3Q9ERD7 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Tubb3Q9ERD7 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.99■□□□□ 0.63
Tubb3Q9ERD7 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Tubb3Q9ERD7 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
Tubb3Q9ERD7 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Tubb3Q9ERD7 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tubb3Q9ERD7 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tubb3Q9ERD7 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.98■□□□□ 0.63
Tubb3Q9ERD7 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.98■□□□□ 0.63
Tubb3Q9ERD7 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tubb3Q9ERD7 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Tubb3Q9ERD7 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tubb3Q9ERD7 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Tubb3Q9ERD7 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tubb3Q9ERD7 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Tubb3Q9ERD7 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Tubb3Q9ERD7 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Tubb3Q9ERD7 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.98■□□□□ 0.63
Tubb3Q9ERD7 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
Tubb3Q9ERD7 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Tubb3Q9ERD7 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Tubb3Q9ERD7 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tubb3Q9ERD7 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Tubb3Q9ERD7 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tubb3Q9ERD7 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.97■□□□□ 0.63
Tubb3Q9ERD7 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tubb3Q9ERD7 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tubb3Q9ERD7 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tubb3Q9ERD7 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tubb3Q9ERD7 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Tubb3Q9ERD7 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Tubb3Q9ERD7 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.96■□□□□ 0.63
Tubb3Q9ERD7 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Tubb3Q9ERD7 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Tubb3Q9ERD7 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tubb3Q9ERD7 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Tubb3Q9ERD7 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Tubb3Q9ERD7 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.96■□□□□ 0.63
Tubb3Q9ERD7 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.96■□□□□ 0.63
Tubb3Q9ERD7 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.96■□□□□ 0.63
Tubb3Q9ERD7 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tubb3Q9ERD7 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Tubb3Q9ERD7 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tubb3Q9ERD7 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tubb3Q9ERD7 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tubb3Q9ERD7 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tubb3Q9ERD7 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.96■□□□□ 0.63
Tubb3Q9ERD7 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Tubb3Q9ERD7 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Tubb3Q9ERD7 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tubb3Q9ERD7 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tubb3Q9ERD7 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tubb3Q9ERD7 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tubb3Q9ERD7 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tubb3Q9ERD7 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Tubb3Q9ERD7 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.95■□□□□ 0.62
Tubb3Q9ERD7 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Tubb3Q9ERD7 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Tubb3Q9ERD7 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Tubb3Q9ERD7 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tubb3Q9ERD7 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tubb3Q9ERD7 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Tubb3Q9ERD7 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Tubb3Q9ERD7 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Tubb3Q9ERD7 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Tubb3Q9ERD7 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tubb3Q9ERD7 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Tubb3Q9ERD7 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
Tubb3Q9ERD7 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tubb3Q9ERD7 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Tubb3Q9ERD7 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.94■□□□□ 0.62
Tubb3Q9ERD7 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Tubb3Q9ERD7 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tubb3Q9ERD7 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tubb3Q9ERD7 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.94■□□□□ 0.62
Tubb3Q9ERD7 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Tubb3Q9ERD7 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Tubb3Q9ERD7 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.94■□□□□ 0.62
Tubb3Q9ERD7 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tubb3Q9ERD7 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tubb3Q9ERD7 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tubb3Q9ERD7 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tubb3Q9ERD7 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.93■□□□□ 0.62
Tubb3Q9ERD7 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Tubb3Q9ERD7 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tubb3Q9ERD7 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tubb3Q9ERD7 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tubb3Q9ERD7 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Tubb3Q9ERD7 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Tubb3Q9ERD7 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
Tubb3Q9ERD7 Gm6627-201ENSMUST00000218299 2386 ntBASIC18.93■□□□□ 0.62
Tubb3Q9ERD7 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms