Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgn3Q9DCB1 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgn3Q9DCB1 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmgn3Q9DCB1 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgn3Q9DCB1 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgn3Q9DCB1 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.96■□□□□ 0.47
Hmgn3Q9DCB1 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgn3Q9DCB1 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgn3Q9DCB1 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgn3Q9DCB1 Nsd1-203ENSMUST00000224156 1149 ntBASIC17.96■□□□□ 0.47
Hmgn3Q9DCB1 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgn3Q9DCB1 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgn3Q9DCB1 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgn3Q9DCB1 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgn3Q9DCB1 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.96■□□□□ 0.47
Hmgn3Q9DCB1 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgn3Q9DCB1 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmgn3Q9DCB1 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgn3Q9DCB1 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgn3Q9DCB1 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgn3Q9DCB1 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Hmgn3Q9DCB1 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgn3Q9DCB1 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgn3Q9DCB1 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgn3Q9DCB1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgn3Q9DCB1 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Hmgn3Q9DCB1 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgn3Q9DCB1 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Hmgn3Q9DCB1 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.95■□□□□ 0.46
Hmgn3Q9DCB1 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgn3Q9DCB1 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgn3Q9DCB1 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgn3Q9DCB1 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.95■□□□□ 0.46
Hmgn3Q9DCB1 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgn3Q9DCB1 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Hmgn3Q9DCB1 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgn3Q9DCB1 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Hmgn3Q9DCB1 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmgn3Q9DCB1 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.94■□□□□ 0.46
Hmgn3Q9DCB1 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgn3Q9DCB1 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.94■□□□□ 0.46
Hmgn3Q9DCB1 Gm45444-201ENSMUST00000211394 898 ntBASIC17.94■□□□□ 0.46
Hmgn3Q9DCB1 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgn3Q9DCB1 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC17.94■□□□□ 0.46
Hmgn3Q9DCB1 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgn3Q9DCB1 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgn3Q9DCB1 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgn3Q9DCB1 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgn3Q9DCB1 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgn3Q9DCB1 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Hmgn3Q9DCB1 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.94■□□□□ 0.46
Hmgn3Q9DCB1 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmgn3Q9DCB1 AA386476-201ENSMUST00000098781 1665 ntBASIC17.93■□□□□ 0.46
Hmgn3Q9DCB1 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgn3Q9DCB1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgn3Q9DCB1 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgn3Q9DCB1 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.93■□□□□ 0.46
Hmgn3Q9DCB1 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.93■□□□□ 0.46
Hmgn3Q9DCB1 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmgn3Q9DCB1 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgn3Q9DCB1 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgn3Q9DCB1 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgn3Q9DCB1 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgn3Q9DCB1 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgn3Q9DCB1 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.92■□□□□ 0.46
Hmgn3Q9DCB1 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.92■□□□□ 0.46
Hmgn3Q9DCB1 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgn3Q9DCB1 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgn3Q9DCB1 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgn3Q9DCB1 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgn3Q9DCB1 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgn3Q9DCB1 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgn3Q9DCB1 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgn3Q9DCB1 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Hmgn3Q9DCB1 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgn3Q9DCB1 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmgn3Q9DCB1 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgn3Q9DCB1 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgn3Q9DCB1 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Hmgn3Q9DCB1 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgn3Q9DCB1 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Hmgn3Q9DCB1 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.91■□□□□ 0.46
Hmgn3Q9DCB1 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.91■□□□□ 0.46
Hmgn3Q9DCB1 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgn3Q9DCB1 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgn3Q9DCB1 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Hmgn3Q9DCB1 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.91■□□□□ 0.46
Hmgn3Q9DCB1 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgn3Q9DCB1 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmgn3Q9DCB1 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Hmgn3Q9DCB1 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hmgn3Q9DCB1 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Hmgn3Q9DCB1 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hmgn3Q9DCB1 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hmgn3Q9DCB1 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hmgn3Q9DCB1 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.9■□□□□ 0.46
Hmgn3Q9DCB1 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hmgn3Q9DCB1 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hmgn3Q9DCB1 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Hmgn3Q9DCB1 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms