Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdc40Q9DC48 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cdc40Q9DC48 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cdc40Q9DC48 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdc40Q9DC48 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cdc40Q9DC48 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Cdc40Q9DC48 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.7■□□□□ 0.42
Cdc40Q9DC48 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdc40Q9DC48 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdc40Q9DC48 Gm9988-201ENSMUST00000069786 435 ntBASIC17.7■□□□□ 0.42
Cdc40Q9DC48 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdc40Q9DC48 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdc40Q9DC48 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdc40Q9DC48 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cdc40Q9DC48 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Cdc40Q9DC48 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Cdc40Q9DC48 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdc40Q9DC48 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdc40Q9DC48 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdc40Q9DC48 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cdc40Q9DC48 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Cdc40Q9DC48 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC17.69■□□□□ 0.42
Cdc40Q9DC48 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC17.69■□□□□ 0.42
Cdc40Q9DC48 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.69■□□□□ 0.42
Cdc40Q9DC48 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Cdc40Q9DC48 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdc40Q9DC48 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdc40Q9DC48 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdc40Q9DC48 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cdc40Q9DC48 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cdc40Q9DC48 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdc40Q9DC48 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cdc40Q9DC48 Golph3-202ENSMUST00000226517 2359 ntBASIC17.68■□□□□ 0.42
Cdc40Q9DC48 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cdc40Q9DC48 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.68■□□□□ 0.42
Cdc40Q9DC48 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Cdc40Q9DC48 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdc40Q9DC48 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdc40Q9DC48 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Cdc40Q9DC48 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Cdc40Q9DC48 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdc40Q9DC48 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Cdc40Q9DC48 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdc40Q9DC48 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cdc40Q9DC48 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Cdc40Q9DC48 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.68■□□□□ 0.42
Cdc40Q9DC48 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdc40Q9DC48 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdc40Q9DC48 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
Cdc40Q9DC48 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdc40Q9DC48 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cdc40Q9DC48 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdc40Q9DC48 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdc40Q9DC48 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdc40Q9DC48 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Cdc40Q9DC48 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.67■□□□□ 0.42
Cdc40Q9DC48 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdc40Q9DC48 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdc40Q9DC48 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdc40Q9DC48 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdc40Q9DC48 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cdc40Q9DC48 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Cdc40Q9DC48 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Cdc40Q9DC48 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Cdc40Q9DC48 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.66■□□□□ 0.42
Cdc40Q9DC48 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdc40Q9DC48 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Cdc40Q9DC48 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdc40Q9DC48 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.66■□□□□ 0.42
Cdc40Q9DC48 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.66■□□□□ 0.42
Cdc40Q9DC48 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.66■□□□□ 0.42
Cdc40Q9DC48 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdc40Q9DC48 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Cdc40Q9DC48 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdc40Q9DC48 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdc40Q9DC48 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cdc40Q9DC48 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Cdc40Q9DC48 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cdc40Q9DC48 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdc40Q9DC48 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdc40Q9DC48 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdc40Q9DC48 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdc40Q9DC48 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdc40Q9DC48 Gm10849-201ENSMUST00000100397 618 ntBASIC17.65■□□□□ 0.42
Cdc40Q9DC48 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cdc40Q9DC48 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdc40Q9DC48 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdc40Q9DC48 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdc40Q9DC48 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdc40Q9DC48 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdc40Q9DC48 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdc40Q9DC48 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdc40Q9DC48 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cdc40Q9DC48 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cdc40Q9DC48 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cdc40Q9DC48 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Cdc40Q9DC48 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Cdc40Q9DC48 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Cdc40Q9DC48 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.64■□□□□ 0.41
Cdc40Q9DC48 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms