Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rrp8Q9DB85 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rrp8Q9DB85 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rrp8Q9DB85 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rrp8Q9DB85 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.78■□□□□ 0.6
Rrp8Q9DB85 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Rrp8Q9DB85 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rrp8Q9DB85 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rrp8Q9DB85 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Rrp8Q9DB85 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.77■□□□□ 0.6
Rrp8Q9DB85 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rrp8Q9DB85 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.77■□□□□ 0.6
Rrp8Q9DB85 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rrp8Q9DB85 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rrp8Q9DB85 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rrp8Q9DB85 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rrp8Q9DB85 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rrp8Q9DB85 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rrp8Q9DB85 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rrp8Q9DB85 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rrp8Q9DB85 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rrp8Q9DB85 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.76■□□□□ 0.59
Rrp8Q9DB85 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rrp8Q9DB85 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rrp8Q9DB85 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rrp8Q9DB85 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.76■□□□□ 0.59
Rrp8Q9DB85 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rrp8Q9DB85 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rrp8Q9DB85 Rab3c-203ENSMUST00000224180 967 ntBASIC18.76■□□□□ 0.59
Rrp8Q9DB85 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rrp8Q9DB85 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rrp8Q9DB85 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.76■□□□□ 0.59
Rrp8Q9DB85 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.76■□□□□ 0.59
Rrp8Q9DB85 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Rrp8Q9DB85 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Rrp8Q9DB85 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Rrp8Q9DB85 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
Rrp8Q9DB85 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rrp8Q9DB85 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Rrp8Q9DB85 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rrp8Q9DB85 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rrp8Q9DB85 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC18.75■□□□□ 0.59
Rrp8Q9DB85 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rrp8Q9DB85 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rrp8Q9DB85 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rrp8Q9DB85 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Rrp8Q9DB85 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rrp8Q9DB85 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rrp8Q9DB85 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rrp8Q9DB85 Gm26524-201ENSMUST00000192339 390 ntBASIC18.74■□□□□ 0.59
Rrp8Q9DB85 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Rrp8Q9DB85 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Rrp8Q9DB85 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rrp8Q9DB85 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rrp8Q9DB85 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rrp8Q9DB85 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.74■□□□□ 0.59
Rrp8Q9DB85 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rrp8Q9DB85 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Rrp8Q9DB85 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Rrp8Q9DB85 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
Rrp8Q9DB85 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rrp8Q9DB85 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Rrp8Q9DB85 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rrp8Q9DB85 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.73■□□□□ 0.59
Rrp8Q9DB85 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Rrp8Q9DB85 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rrp8Q9DB85 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Rrp8Q9DB85 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.72■□□□□ 0.59
Rrp8Q9DB85 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.72■□□□□ 0.59
Rrp8Q9DB85 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rrp8Q9DB85 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Rrp8Q9DB85 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.72■□□□□ 0.59
Rrp8Q9DB85 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rrp8Q9DB85 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rrp8Q9DB85 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rrp8Q9DB85 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rrp8Q9DB85 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rrp8Q9DB85 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Rrp8Q9DB85 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.72■□□□□ 0.59
Rrp8Q9DB85 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.72■□□□□ 0.59
Rrp8Q9DB85 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rrp8Q9DB85 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Rrp8Q9DB85 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rrp8Q9DB85 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Rrp8Q9DB85 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rrp8Q9DB85 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rrp8Q9DB85 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.71■□□□□ 0.59
Rrp8Q9DB85 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rrp8Q9DB85 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rrp8Q9DB85 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.71■□□□□ 0.59
Rrp8Q9DB85 Mir7071-201ENSMUST00000184847 69 ntBASIC18.71■□□□□ 0.59
Rrp8Q9DB85 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rrp8Q9DB85 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Rrp8Q9DB85 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Rrp8Q9DB85 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rrp8Q9DB85 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC18.7■□□□□ 0.58
Rrp8Q9DB85 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rrp8Q9DB85 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Rrp8Q9DB85 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Rrp8Q9DB85 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms