Protein–RNA interactions for Protein: Q9D6I0

Rtl8c, Cxx1c protein, mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl8cQ9D6I0 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rtl8cQ9D6I0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rtl8cQ9D6I0 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rtl8cQ9D6I0 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rtl8cQ9D6I0 Gm27801-201ENSMUST00000184174 223 ntBASIC17.08■□□□□ 0.32
Rtl8cQ9D6I0 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rtl8cQ9D6I0 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rtl8cQ9D6I0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rtl8cQ9D6I0 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rtl8cQ9D6I0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rtl8cQ9D6I0 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Rtl8cQ9D6I0 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rtl8cQ9D6I0 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Rtl8cQ9D6I0 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rtl8cQ9D6I0 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rtl8cQ9D6I0 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtl8cQ9D6I0 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rtl8cQ9D6I0 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtl8cQ9D6I0 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Rtl8cQ9D6I0 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtl8cQ9D6I0 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Rtl8cQ9D6I0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.07■□□□□ 0.32
Rtl8cQ9D6I0 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtl8cQ9D6I0 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtl8cQ9D6I0 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Rtl8cQ9D6I0 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtl8cQ9D6I0 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rtl8cQ9D6I0 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
Rtl8cQ9D6I0 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtl8cQ9D6I0 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.06■□□□□ 0.32
Rtl8cQ9D6I0 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
Rtl8cQ9D6I0 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtl8cQ9D6I0 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtl8cQ9D6I0 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtl8cQ9D6I0 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtl8cQ9D6I0 Gm6139-201ENSMUST00000079261 882 ntBASIC17.06■□□□□ 0.32
Rtl8cQ9D6I0 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Rtl8cQ9D6I0 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Rtl8cQ9D6I0 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Rtl8cQ9D6I0 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Rtl8cQ9D6I0 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rtl8cQ9D6I0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Rtl8cQ9D6I0 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Rtl8cQ9D6I0 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtl8cQ9D6I0 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtl8cQ9D6I0 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtl8cQ9D6I0 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtl8cQ9D6I0 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.05■□□□□ 0.32
Rtl8cQ9D6I0 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Rtl8cQ9D6I0 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Rtl8cQ9D6I0 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtl8cQ9D6I0 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtl8cQ9D6I0 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC17.05■□□□□ 0.32
Rtl8cQ9D6I0 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtl8cQ9D6I0 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Rtl8cQ9D6I0 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Rtl8cQ9D6I0 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Rtl8cQ9D6I0 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.04■□□□□ 0.32
Rtl8cQ9D6I0 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtl8cQ9D6I0 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtl8cQ9D6I0 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.04■□□□□ 0.32
Rtl8cQ9D6I0 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.04■□□□□ 0.32
Rtl8cQ9D6I0 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.04■□□□□ 0.32
Rtl8cQ9D6I0 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Rtl8cQ9D6I0 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.04■□□□□ 0.32
Rtl8cQ9D6I0 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Rtl8cQ9D6I0 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Rtl8cQ9D6I0 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtl8cQ9D6I0 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtl8cQ9D6I0 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtl8cQ9D6I0 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Rtl8cQ9D6I0 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Rtl8cQ9D6I0 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC17.03■□□□□ 0.32
Rtl8cQ9D6I0 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtl8cQ9D6I0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Rtl8cQ9D6I0 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC17.03■□□□□ 0.32
Rtl8cQ9D6I0 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtl8cQ9D6I0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtl8cQ9D6I0 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtl8cQ9D6I0 Gm26833-201ENSMUST00000180899 440 ntBASIC17.03■□□□□ 0.32
Rtl8cQ9D6I0 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Rtl8cQ9D6I0 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Rtl8cQ9D6I0 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.03■□□□□ 0.32
Rtl8cQ9D6I0 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Rtl8cQ9D6I0 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rtl8cQ9D6I0 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rtl8cQ9D6I0 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Rtl8cQ9D6I0 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rtl8cQ9D6I0 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rtl8cQ9D6I0 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Rtl8cQ9D6I0 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Rtl8cQ9D6I0 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Rtl8cQ9D6I0 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Rtl8cQ9D6I0 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rtl8cQ9D6I0 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rtl8cQ9D6I0 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rtl8cQ9D6I0 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Rtl8cQ9D6I0 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Rtl8cQ9D6I0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Rtl8cQ9D6I0 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms