Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.41■□□□□ 0.7
Sf3a3Q9D554 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Sf3a3Q9D554 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sf3a3Q9D554 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sf3a3Q9D554 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sf3a3Q9D554 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sf3a3Q9D554 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
Sf3a3Q9D554 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sf3a3Q9D554 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sf3a3Q9D554 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sf3a3Q9D554 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sf3a3Q9D554 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sf3a3Q9D554 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.4■□□□□ 0.7
Sf3a3Q9D554 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.4■□□□□ 0.7
Sf3a3Q9D554 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sf3a3Q9D554 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sf3a3Q9D554 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sf3a3Q9D554 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
Sf3a3Q9D554 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sf3a3Q9D554 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sf3a3Q9D554 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Sf3a3Q9D554 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sf3a3Q9D554 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sf3a3Q9D554 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Sf3a3Q9D554 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Sf3a3Q9D554 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sf3a3Q9D554 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sf3a3Q9D554 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sf3a3Q9D554 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Sf3a3Q9D554 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Sf3a3Q9D554 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sf3a3Q9D554 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.38■□□□□ 0.69
Sf3a3Q9D554 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.38■□□□□ 0.69
Sf3a3Q9D554 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.38■□□□□ 0.69
Sf3a3Q9D554 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sf3a3Q9D554 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sf3a3Q9D554 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Sf3a3Q9D554 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sf3a3Q9D554 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sf3a3Q9D554 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Sf3a3Q9D554 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sf3a3Q9D554 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sf3a3Q9D554 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sf3a3Q9D554 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sf3a3Q9D554 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sf3a3Q9D554 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sf3a3Q9D554 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sf3a3Q9D554 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Sf3a3Q9D554 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sf3a3Q9D554 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sf3a3Q9D554 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.37■□□□□ 0.69
Sf3a3Q9D554 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.37■□□□□ 0.69
Sf3a3Q9D554 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sf3a3Q9D554 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sf3a3Q9D554 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sf3a3Q9D554 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sf3a3Q9D554 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sf3a3Q9D554 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sf3a3Q9D554 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sf3a3Q9D554 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Sf3a3Q9D554 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sf3a3Q9D554 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sf3a3Q9D554 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sf3a3Q9D554 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Sf3a3Q9D554 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Sf3a3Q9D554 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Sf3a3Q9D554 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sf3a3Q9D554 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sf3a3Q9D554 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sf3a3Q9D554 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Sf3a3Q9D554 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sf3a3Q9D554 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sf3a3Q9D554 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sf3a3Q9D554 BC021767-201ENSMUST00000126387 1716 ntBASIC19.35■□□□□ 0.69
Sf3a3Q9D554 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sf3a3Q9D554 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sf3a3Q9D554 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sf3a3Q9D554 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.35■□□□□ 0.69
Sf3a3Q9D554 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3a3Q9D554 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3a3Q9D554 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3a3Q9D554 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3a3Q9D554 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3a3Q9D554 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3a3Q9D554 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3a3Q9D554 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3a3Q9D554 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3a3Q9D554 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3a3Q9D554 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3a3Q9D554 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3a3Q9D554 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Sf3a3Q9D554 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Sf3a3Q9D554 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sf3a3Q9D554 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sf3a3Q9D554 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Sf3a3Q9D554 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sf3a3Q9D554 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sf3a3Q9D554 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sf3a3Q9D554 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sf3a3Q9D554 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms