Protein–RNA interactions for Protein: Q9D3I0

5530400C23Rik, RIKEN cDNA 5530400C23 gene, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5530400C23RikQ9D3I0 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
5530400C23RikQ9D3I0 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
5530400C23RikQ9D3I0 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
5530400C23RikQ9D3I0 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
5530400C23RikQ9D3I0 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
5530400C23RikQ9D3I0 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
5530400C23RikQ9D3I0 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
5530400C23RikQ9D3I0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
5530400C23RikQ9D3I0 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
5530400C23RikQ9D3I0 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
5530400C23RikQ9D3I0 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
5530400C23RikQ9D3I0 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
5530400C23RikQ9D3I0 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
5530400C23RikQ9D3I0 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
5530400C23RikQ9D3I0 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
5530400C23RikQ9D3I0 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.73■□□□□ 0.59
5530400C23RikQ9D3I0 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
5530400C23RikQ9D3I0 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
5530400C23RikQ9D3I0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
5530400C23RikQ9D3I0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
5530400C23RikQ9D3I0 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.73■□□□□ 0.59
5530400C23RikQ9D3I0 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
5530400C23RikQ9D3I0 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
5530400C23RikQ9D3I0 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
5530400C23RikQ9D3I0 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
5530400C23RikQ9D3I0 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
5530400C23RikQ9D3I0 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
5530400C23RikQ9D3I0 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
5530400C23RikQ9D3I0 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
5530400C23RikQ9D3I0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
5530400C23RikQ9D3I0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
5530400C23RikQ9D3I0 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
5530400C23RikQ9D3I0 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.72■□□□□ 0.59
5530400C23RikQ9D3I0 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC18.72■□□□□ 0.59
5530400C23RikQ9D3I0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
5530400C23RikQ9D3I0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.72■□□□□ 0.59
5530400C23RikQ9D3I0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
5530400C23RikQ9D3I0 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
5530400C23RikQ9D3I0 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
5530400C23RikQ9D3I0 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.72■□□□□ 0.59
5530400C23RikQ9D3I0 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
5530400C23RikQ9D3I0 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
5530400C23RikQ9D3I0 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
5530400C23RikQ9D3I0 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
5530400C23RikQ9D3I0 Iqck-206ENSMUST00000208658 2891 ntBASIC18.71■□□□□ 0.59
5530400C23RikQ9D3I0 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
5530400C23RikQ9D3I0 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.71■□□□□ 0.59
5530400C23RikQ9D3I0 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
5530400C23RikQ9D3I0 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
5530400C23RikQ9D3I0 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
5530400C23RikQ9D3I0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.71■□□□□ 0.59
5530400C23RikQ9D3I0 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
5530400C23RikQ9D3I0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
5530400C23RikQ9D3I0 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
5530400C23RikQ9D3I0 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC18.71■□□□□ 0.58
5530400C23RikQ9D3I0 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
5530400C23RikQ9D3I0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
5530400C23RikQ9D3I0 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
5530400C23RikQ9D3I0 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
5530400C23RikQ9D3I0 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
5530400C23RikQ9D3I0 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
5530400C23RikQ9D3I0 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
5530400C23RikQ9D3I0 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
5530400C23RikQ9D3I0 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
5530400C23RikQ9D3I0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
5530400C23RikQ9D3I0 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
5530400C23RikQ9D3I0 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
5530400C23RikQ9D3I0 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
5530400C23RikQ9D3I0 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
5530400C23RikQ9D3I0 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
5530400C23RikQ9D3I0 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.69■□□□□ 0.58
5530400C23RikQ9D3I0 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
5530400C23RikQ9D3I0 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
5530400C23RikQ9D3I0 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
5530400C23RikQ9D3I0 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
5530400C23RikQ9D3I0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
5530400C23RikQ9D3I0 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
5530400C23RikQ9D3I0 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
5530400C23RikQ9D3I0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
5530400C23RikQ9D3I0 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
5530400C23RikQ9D3I0 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
5530400C23RikQ9D3I0 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
5530400C23RikQ9D3I0 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
5530400C23RikQ9D3I0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
5530400C23RikQ9D3I0 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
5530400C23RikQ9D3I0 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
5530400C23RikQ9D3I0 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.68■□□□□ 0.58
5530400C23RikQ9D3I0 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
5530400C23RikQ9D3I0 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.68■□□□□ 0.58
5530400C23RikQ9D3I0 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.68■□□□□ 0.58
5530400C23RikQ9D3I0 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
5530400C23RikQ9D3I0 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
5530400C23RikQ9D3I0 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
5530400C23RikQ9D3I0 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
5530400C23RikQ9D3I0 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
5530400C23RikQ9D3I0 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
5530400C23RikQ9D3I0 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
5530400C23RikQ9D3I0 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
5530400C23RikQ9D3I0 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
5530400C23RikQ9D3I0 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 309.3 ms