Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Mrpl55Q9CZ83 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Mrpl55Q9CZ83 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mrpl55Q9CZ83 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Mrpl55Q9CZ83 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Mrpl55Q9CZ83 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Mrpl55Q9CZ83 Gm9207-201ENSMUST00000198773 1115 ntBASIC12.54□□□□□ -0.4
Mrpl55Q9CZ83 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mrpl55Q9CZ83 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mrpl55Q9CZ83 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mrpl55Q9CZ83 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mrpl55Q9CZ83 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Mrpl55Q9CZ83 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mrpl55Q9CZ83 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mrpl55Q9CZ83 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Mrpl55Q9CZ83 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Mrpl55Q9CZ83 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mrpl55Q9CZ83 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Mrpl55Q9CZ83 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mrpl55Q9CZ83 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC12.53□□□□□ -0.4
Mrpl55Q9CZ83 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Mrpl55Q9CZ83 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Mrpl55Q9CZ83 AC115037.1-201ENSMUST00000223391 2173 ntBASIC12.53□□□□□ -0.4
Mrpl55Q9CZ83 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mrpl55Q9CZ83 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Mrpl55Q9CZ83 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mrpl55Q9CZ83 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Mrpl55Q9CZ83 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mrpl55Q9CZ83 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mrpl55Q9CZ83 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
Mrpl55Q9CZ83 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mrpl55Q9CZ83 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC12.53□□□□□ -0.4
Mrpl55Q9CZ83 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Mrpl55Q9CZ83 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mrpl55Q9CZ83 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Mrpl55Q9CZ83 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Mrpl55Q9CZ83 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Mrpl55Q9CZ83 Haglr-201ENSMUST00000100000 2085 ntBASIC12.52□□□□□ -0.4
Mrpl55Q9CZ83 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mrpl55Q9CZ83 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mrpl55Q9CZ83 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mrpl55Q9CZ83 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mrpl55Q9CZ83 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Mrpl55Q9CZ83 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mrpl55Q9CZ83 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC12.52□□□□□ -0.41
Mrpl55Q9CZ83 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC12.52□□□□□ -0.41
Mrpl55Q9CZ83 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mrpl55Q9CZ83 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Mrpl55Q9CZ83 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mrpl55Q9CZ83 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mrpl55Q9CZ83 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mrpl55Q9CZ83 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Mrpl55Q9CZ83 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Mrpl55Q9CZ83 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Mrpl55Q9CZ83 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl55Q9CZ83 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC12.51□□□□□ -0.41
Mrpl55Q9CZ83 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl55Q9CZ83 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl55Q9CZ83 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl55Q9CZ83 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl55Q9CZ83 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl55Q9CZ83 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl55Q9CZ83 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl55Q9CZ83 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl55Q9CZ83 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl55Q9CZ83 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl55Q9CZ83 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Mrpl55Q9CZ83 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl55Q9CZ83 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl55Q9CZ83 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl55Q9CZ83 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Mrpl55Q9CZ83 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl55Q9CZ83 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl55Q9CZ83 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Mrpl55Q9CZ83 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Mrpl55Q9CZ83 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC12.51□□□□□ -0.41
Mrpl55Q9CZ83 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC12.51□□□□□ -0.41
Mrpl55Q9CZ83 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Mrpl55Q9CZ83 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC12.51□□□□□ -0.41
Mrpl55Q9CZ83 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl55Q9CZ83 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Mrpl55Q9CZ83 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl55Q9CZ83 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl55Q9CZ83 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl55Q9CZ83 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl55Q9CZ83 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl55Q9CZ83 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl55Q9CZ83 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Mrpl55Q9CZ83 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl55Q9CZ83 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl55Q9CZ83 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Mrpl55Q9CZ83 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Mrpl55Q9CZ83 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl55Q9CZ83 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl55Q9CZ83 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Mrpl55Q9CZ83 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Mrpl55Q9CZ83 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl55Q9CZ83 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Mrpl55Q9CZ83 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Mrpl55Q9CZ83 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms