Protein–RNA interactions for Protein: Q9CR78

Msantd3, Myb/SANT-like DNA-binding domain-containing protein 3, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msantd3Q9CR78 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Msantd3Q9CR78 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Msantd3Q9CR78 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Msantd3Q9CR78 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Msantd3Q9CR78 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Msantd3Q9CR78 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Msantd3Q9CR78 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Msantd3Q9CR78 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Msantd3Q9CR78 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Msantd3Q9CR78 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Msantd3Q9CR78 Gm12527-201ENSMUST00000117967 564 ntBASIC18.32■□□□□ 0.52
Msantd3Q9CR78 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Msantd3Q9CR78 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Msantd3Q9CR78 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.32■□□□□ 0.52
Msantd3Q9CR78 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Msantd3Q9CR78 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Msantd3Q9CR78 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Msantd3Q9CR78 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Msantd3Q9CR78 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Msantd3Q9CR78 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Msantd3Q9CR78 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Msantd3Q9CR78 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Msantd3Q9CR78 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Msantd3Q9CR78 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Msantd3Q9CR78 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.31■□□□□ 0.52
Msantd3Q9CR78 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Msantd3Q9CR78 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC18.31■□□□□ 0.52
Msantd3Q9CR78 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Msantd3Q9CR78 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Msantd3Q9CR78 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Msantd3Q9CR78 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Msantd3Q9CR78 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Msantd3Q9CR78 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.3■□□□□ 0.52
Msantd3Q9CR78 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Msantd3Q9CR78 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.3■□□□□ 0.52
Msantd3Q9CR78 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Msantd3Q9CR78 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Msantd3Q9CR78 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Msantd3Q9CR78 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Msantd3Q9CR78 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Msantd3Q9CR78 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Msantd3Q9CR78 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Msantd3Q9CR78 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Msantd3Q9CR78 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Msantd3Q9CR78 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Msantd3Q9CR78 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Msantd3Q9CR78 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Msantd3Q9CR78 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Msantd3Q9CR78 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Msantd3Q9CR78 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Msantd3Q9CR78 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Msantd3Q9CR78 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC18.29■□□□□ 0.52
Msantd3Q9CR78 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Msantd3Q9CR78 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Msantd3Q9CR78 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Msantd3Q9CR78 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.29■□□□□ 0.52
Msantd3Q9CR78 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.29■□□□□ 0.52
Msantd3Q9CR78 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Msantd3Q9CR78 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Msantd3Q9CR78 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Msantd3Q9CR78 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Msantd3Q9CR78 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC18.28■□□□□ 0.52
Msantd3Q9CR78 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Msantd3Q9CR78 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.28■□□□□ 0.52
Msantd3Q9CR78 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Msantd3Q9CR78 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Msantd3Q9CR78 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Msantd3Q9CR78 Gm43859-201ENSMUST00000200075 1412 ntBASIC18.28■□□□□ 0.52
Msantd3Q9CR78 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
Msantd3Q9CR78 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Msantd3Q9CR78 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Msantd3Q9CR78 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Msantd3Q9CR78 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Msantd3Q9CR78 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Msantd3Q9CR78 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Msantd3Q9CR78 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Msantd3Q9CR78 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Msantd3Q9CR78 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Msantd3Q9CR78 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Msantd3Q9CR78 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Msantd3Q9CR78 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Msantd3Q9CR78 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Msantd3Q9CR78 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.27■□□□□ 0.52
Msantd3Q9CR78 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.27■□□□□ 0.52
Msantd3Q9CR78 Gm20049-201ENSMUST00000219950 730 ntBASIC18.27■□□□□ 0.52
Msantd3Q9CR78 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Msantd3Q9CR78 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Msantd3Q9CR78 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Msantd3Q9CR78 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Msantd3Q9CR78 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.27■□□□□ 0.51
Msantd3Q9CR78 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Msantd3Q9CR78 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Msantd3Q9CR78 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Msantd3Q9CR78 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Msantd3Q9CR78 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Msantd3Q9CR78 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Msantd3Q9CR78 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Msantd3Q9CR78 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Msantd3Q9CR78 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Msantd3Q9CR78 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms