Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retreg3Q9CQV4 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retreg3Q9CQV4 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.23■□□□□ 0.67
Retreg3Q9CQV4 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retreg3Q9CQV4 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retreg3Q9CQV4 Gm42569-201ENSMUST00000200539 472 ntBASIC19.23■□□□□ 0.67
Retreg3Q9CQV4 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC19.23■□□□□ 0.67
Retreg3Q9CQV4 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Retreg3Q9CQV4 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Retreg3Q9CQV4 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Retreg3Q9CQV4 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Retreg3Q9CQV4 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Retreg3Q9CQV4 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retreg3Q9CQV4 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retreg3Q9CQV4 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.22■□□□□ 0.67
Retreg3Q9CQV4 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC19.22■□□□□ 0.67
Retreg3Q9CQV4 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retreg3Q9CQV4 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC19.22■□□□□ 0.67
Retreg3Q9CQV4 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.22■□□□□ 0.67
Retreg3Q9CQV4 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retreg3Q9CQV4 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retreg3Q9CQV4 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.22■□□□□ 0.67
Retreg3Q9CQV4 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retreg3Q9CQV4 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Retreg3Q9CQV4 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.22■□□□□ 0.67
Retreg3Q9CQV4 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retreg3Q9CQV4 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Retreg3Q9CQV4 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Retreg3Q9CQV4 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.21■□□□□ 0.67
Retreg3Q9CQV4 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.21■□□□□ 0.67
Retreg3Q9CQV4 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.21■□□□□ 0.67
Retreg3Q9CQV4 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.21■□□□□ 0.67
Retreg3Q9CQV4 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retreg3Q9CQV4 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retreg3Q9CQV4 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Retreg3Q9CQV4 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retreg3Q9CQV4 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retreg3Q9CQV4 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.21■□□□□ 0.67
Retreg3Q9CQV4 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Retreg3Q9CQV4 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Retreg3Q9CQV4 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retreg3Q9CQV4 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retreg3Q9CQV4 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Retreg3Q9CQV4 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retreg3Q9CQV4 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retreg3Q9CQV4 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retreg3Q9CQV4 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
Retreg3Q9CQV4 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retreg3Q9CQV4 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Retreg3Q9CQV4 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.19■□□□□ 0.66
Retreg3Q9CQV4 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retreg3Q9CQV4 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retreg3Q9CQV4 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
Retreg3Q9CQV4 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retreg3Q9CQV4 Gm42642-201ENSMUST00000200683 355 ntBASIC19.19■□□□□ 0.66
Retreg3Q9CQV4 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.19■□□□□ 0.66
Retreg3Q9CQV4 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Retreg3Q9CQV4 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retreg3Q9CQV4 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retreg3Q9CQV4 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retreg3Q9CQV4 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retreg3Q9CQV4 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retreg3Q9CQV4 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retreg3Q9CQV4 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Retreg3Q9CQV4 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retreg3Q9CQV4 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.18■□□□□ 0.66
Retreg3Q9CQV4 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.18■□□□□ 0.66
Retreg3Q9CQV4 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.18■□□□□ 0.66
Retreg3Q9CQV4 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retreg3Q9CQV4 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retreg3Q9CQV4 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retreg3Q9CQV4 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Retreg3Q9CQV4 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retreg3Q9CQV4 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Retreg3Q9CQV4 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Retreg3Q9CQV4 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retreg3Q9CQV4 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retreg3Q9CQV4 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retreg3Q9CQV4 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retreg3Q9CQV4 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retreg3Q9CQV4 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retreg3Q9CQV4 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Retreg3Q9CQV4 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retreg3Q9CQV4 Gm7860-201ENSMUST00000121190 879 ntBASIC19.17■□□□□ 0.66
Retreg3Q9CQV4 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.17■□□□□ 0.66
Retreg3Q9CQV4 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.17■□□□□ 0.66
Retreg3Q9CQV4 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retreg3Q9CQV4 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retreg3Q9CQV4 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Retreg3Q9CQV4 Gm10129-202ENSMUST00000193100 1316 ntBASIC19.17■□□□□ 0.66
Retreg3Q9CQV4 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Retreg3Q9CQV4 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retreg3Q9CQV4 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retreg3Q9CQV4 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retreg3Q9CQV4 Gm18688-201ENSMUST00000204695 1859 ntBASIC19.16■□□□□ 0.66
Retreg3Q9CQV4 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retreg3Q9CQV4 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Retreg3Q9CQV4 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.16■□□□□ 0.66
Retreg3Q9CQV4 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.16■□□□□ 0.66
Retreg3Q9CQV4 Gm38205-201ENSMUST00000192243 258 ntBASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms