Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lsm7Q9CQQ8 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.34■□□□□ 0.69
Lsm7Q9CQQ8 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Lsm7Q9CQQ8 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
Lsm7Q9CQQ8 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lsm7Q9CQQ8 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
Lsm7Q9CQQ8 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lsm7Q9CQQ8 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
Lsm7Q9CQQ8 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Lsm7Q9CQQ8 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Lsm7Q9CQQ8 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.33■□□□□ 0.68
Lsm7Q9CQQ8 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lsm7Q9CQQ8 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lsm7Q9CQQ8 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lsm7Q9CQQ8 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lsm7Q9CQQ8 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Lsm7Q9CQQ8 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lsm7Q9CQQ8 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lsm7Q9CQQ8 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.32■□□□□ 0.68
Lsm7Q9CQQ8 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lsm7Q9CQQ8 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC19.32■□□□□ 0.68
Lsm7Q9CQQ8 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lsm7Q9CQQ8 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lsm7Q9CQQ8 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lsm7Q9CQQ8 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.32■□□□□ 0.68
Lsm7Q9CQQ8 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lsm7Q9CQQ8 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lsm7Q9CQQ8 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.31■□□□□ 0.68
Lsm7Q9CQQ8 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Lsm7Q9CQQ8 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.31■□□□□ 0.68
Lsm7Q9CQQ8 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lsm7Q9CQQ8 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.31■□□□□ 0.68
Lsm7Q9CQQ8 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Lsm7Q9CQQ8 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lsm7Q9CQQ8 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lsm7Q9CQQ8 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lsm7Q9CQQ8 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lsm7Q9CQQ8 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Lsm7Q9CQQ8 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.3■□□□□ 0.68
Lsm7Q9CQQ8 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Lsm7Q9CQQ8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.3■□□□□ 0.68
Lsm7Q9CQQ8 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lsm7Q9CQQ8 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Lsm7Q9CQQ8 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lsm7Q9CQQ8 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lsm7Q9CQQ8 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lsm7Q9CQQ8 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.3■□□□□ 0.68
Lsm7Q9CQQ8 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lsm7Q9CQQ8 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lsm7Q9CQQ8 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lsm7Q9CQQ8 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Lsm7Q9CQQ8 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lsm7Q9CQQ8 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lsm7Q9CQQ8 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.29■□□□□ 0.68
Lsm7Q9CQQ8 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
Lsm7Q9CQQ8 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lsm7Q9CQQ8 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Lsm7Q9CQQ8 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lsm7Q9CQQ8 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Lsm7Q9CQQ8 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lsm7Q9CQQ8 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Lsm7Q9CQQ8 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lsm7Q9CQQ8 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Lsm7Q9CQQ8 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lsm7Q9CQQ8 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lsm7Q9CQQ8 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lsm7Q9CQQ8 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Lsm7Q9CQQ8 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Lsm7Q9CQQ8 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lsm7Q9CQQ8 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lsm7Q9CQQ8 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Lsm7Q9CQQ8 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lsm7Q9CQQ8 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.27■□□□□ 0.68
Lsm7Q9CQQ8 Gm13534-201ENSMUST00000121169 513 ntBASIC19.27■□□□□ 0.68
Lsm7Q9CQQ8 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Lsm7Q9CQQ8 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lsm7Q9CQQ8 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lsm7Q9CQQ8 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lsm7Q9CQQ8 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lsm7Q9CQQ8 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Lsm7Q9CQQ8 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
Lsm7Q9CQQ8 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Lsm7Q9CQQ8 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.26■□□□□ 0.67
Lsm7Q9CQQ8 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.26■□□□□ 0.67
Lsm7Q9CQQ8 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.26■□□□□ 0.67
Lsm7Q9CQQ8 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lsm7Q9CQQ8 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lsm7Q9CQQ8 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lsm7Q9CQQ8 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Lsm7Q9CQQ8 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.25■□□□□ 0.67
Lsm7Q9CQQ8 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lsm7Q9CQQ8 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lsm7Q9CQQ8 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Lsm7Q9CQQ8 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lsm7Q9CQQ8 Mir5133-201ENSMUST00000174955 77 ntBASIC19.25■□□□□ 0.67
Lsm7Q9CQQ8 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lsm7Q9CQQ8 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lsm7Q9CQQ8 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lsm7Q9CQQ8 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.25■□□□□ 0.67
Lsm7Q9CQQ8 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms